G109857



Basic Information


Item Value
gene id G109857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7194593 ~ 7195075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU125176
CTGTCATCTGTATCCATCTCTACTGaggtaatcTGTATCCATCTCTACTGAGATCATCTGTATCCATCTCTACTGTCATCTGTATCCATCTCTACTGAGATCATCTGTATCCATCTCTACTTAGATGATATGTATCCATCTCTACTGTCTTCTGTATCCATCTCTACTGAGATCATCTGTATCCATCTCTACTTAGATCATCTGTATCCATCTCTACTGTCATCTGTATCCATCTCTACTTAGATCATCTGTATCCATCTCTATACTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU125176 True 269 lncRNA 0.42 2 7194593 7195075

Neighbor


gene id symbol gene type direction distance location
LOC110535004 LOC106596209 coding upstream 115516 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 115618 7030625 ~ 7078975 (+)
mpp6a LOC106594438 coding upstream 199878 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 250550 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 255843 6912089 ~ 6938750 (+)
pde11al LOC106573285 coding downstream 87355 7282430 ~ 7304709 (+)
cbx3b LOC106573104 coding downstream 163830 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 174268 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 301108 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 420835 7615910 ~ 7706660 (+)
G109854 NA non-coding upstream 4739 7189638 ~ 7189854 (+)
G109853 LOC106598887 non-coding upstream 6204 7188014 ~ 7188389 (+)
G109763 NA non-coding upstream 9881 7182153 ~ 7184712 (+)
G109842 NA non-coding upstream 29236 7163991 ~ 7165357 (+)
G109834 NA non-coding upstream 39431 7154245 ~ 7155162 (+)
G109867 NA non-coding downstream 11785 7206860 ~ 7208949 (+)
G109885 NA non-coding downstream 31572 7226647 ~ 7227034 (+)
G109901 NA non-coding downstream 58699 7253774 ~ 7254702 (+)
G109905 LOC106574028 non-coding downstream 67113 7262188 ~ 7263982 (+)
G109907 NA non-coding downstream 70319 7265394 ~ 7265722 (+)
G109821 NA other upstream 53614 7135247 ~ 7140979 (+)
malsu1 malsu1 other upstream 283388 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 325617 6855864 ~ 6868976 (+)
G109020 NA other upstream 560680 6633078 ~ 6633913 (+)
G110644 NA other downstream 703521 7898596 ~ 7935137 (+)
G110674 NA other downstream 878291 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1841729 8820359 ~ 9072449 (+)

Expression



Co-expression Network