G109909


Basic Information

Item Value
gene id G109909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7266035 ~ 7266451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125246
cacacacacacaccaccttttGTCTTTCTCAGCACGGTGACCTCTGGAGCAGAGGACGGGACGAGGGGGTTCAGGGGTCGTAGTGACGCAGCTCTCACGCCTGTGTCGGGGTCGTCTGGTGAGCGGAACGTTGGGAACAGGGCGAAGCGGGAGATGTGGGACTGATACGGATGTTCTTTTGGAATTGGAACCTTTATCATTATCtctctgtagggagggagggcatAGCAGTGAAGGAAGGACAgccattacaactgtatcattatctCTCTGTGGGGAGGGAGGGCATAGCAGTGAAGGAAGGACAGCcgttacaactgtatcattatctCTCTGTGGGGAGGGAGGGCATAGCAGTGAAGGAAGGACAgccattacaactgtatcattatctCTCTATAGGGAGGGAGGGCATAG

Function

NR:

description
uncharacterized protein C7orf31 homolog isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125246 True 417 lncRNA 0.53 1 7266035 7266451

Neighbor

gene id symbol gene type direction distance location
LOC110535004 LOC106596209 coding upstream 186958 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 187060 7030625 ~ 7078975 (+)
mpp6a LOC106594438 coding upstream 271320 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 321992 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 327285 6912089 ~ 6938750 (+)
pde11al LOC106573285 coding downstream 15979 7282430 ~ 7304709 (+)
cbx3b LOC106573104 coding downstream 92454 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 102892 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 229732 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 349459 7615910 ~ 7706660 (+)
G109908 NA non-coding upstream 101 7265728 ~ 7265934 (+)
G109907 NA non-coding upstream 313 7265394 ~ 7265722 (+)
G109905 LOC106574028 non-coding upstream 2053 7262188 ~ 7263982 (+)
G109901 NA non-coding upstream 11333 7253774 ~ 7254702 (+)
G109885 NA non-coding upstream 39001 7226647 ~ 7227034 (+)
G109917 NA non-coding downstream 26589 7293040 ~ 7293383 (+)
G110139 NA non-coding downstream 45178 7311629 ~ 7311995 (+)
G110153 NA non-coding downstream 55528 7321979 ~ 7322362 (+)
G110175 NA non-coding downstream 69893 7336344 ~ 7336552 (+)
G110177 NA non-coding downstream 71295 7337746 ~ 7338109 (+)
G109821 NA other upstream 125056 7135247 ~ 7140979 (+)
malsu1 malsu1 other upstream 354830 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 397059 6855864 ~ 6868976 (+)
G109020 NA other upstream 632122 6633078 ~ 6633913 (+)
G110644 NA other downstream 632145 7898596 ~ 7935137 (+)
G110674 NA other downstream 806915 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1770353 8820359 ~ 9072449 (+)

Expression


Co-expression Network