XLOC_020864 (sc:d217)


Basic Information

Item Value
gene id XLOC_020864
gene name sc:d217
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7896072 ~ 8006342 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041084
TAAACATCAACGAAGAAGAAGAAGCAACACCGTTAGTCTTTCCGCTGTTAGCTGTTAGATTTTTTATGGTATCTTGACATCATAATTGGAATCgtaaagattatttttattagcatACAAGTAGTGAGTAAATGTGGCTTTGTtccttttttgggggggtttgTTATCAACCGTCGCTATCACTAGTGTGGGGTGTGGTTCGGAAAACAACGCAAAAAAAACGAGTAACTTGcatataaaactgttttttttttgctgggaaCTTCAACATTATGAAGAGGACTTCGAACTTCTTTCATATTTTACTTCTAATTTGCAGTGTGTTTGGTGCTGATGCAGATGAAATGAAAGCAGTGTCTGTGTTTGAGGGAGAGTCTGTCACTTTAAACCCTGATAAGGATATACAGGGGATTTTTCTGGTACTTTGGAGGTTTGGAGACAAAGGTTCCACCATTGCTCAATTCATTGATAAGGAGATCTACTATCCTAACCACACTGGGATATTCAGAGAGAGACTGAAGCTGAATGAGACTGGATCTTTGACCATCAGACATGCAAAAGACACAGATGCTGGACTTTATACAGTGACGATCAACggcaacaaaaatatattatacaagAAATTCATTGTCACTGTCAGTGGTTCAGGTCTGTCTTCAGGTGCTGTAGCAGGAATTGTTGTTATGCTGCTTGTGCTGGTTGCAGTTGCAGCTGTATTGGGTTTTCTTTACTATCGCAACAAGATCTCTGAACTACAGAAACAAATTGATGGCGTTTATCAAACAGCATCAGGAGGGGATGTCACTATAAAGCCTGAAACTAAACTACATCCAGGTGATGAGATACAGTGGTGGTTTTGGAATGAACTCTCCCCGATAGCTGGATTCAAAGATGGAAAGATCTTTACATCCAATAATCCTAAATGGAAAGGCAGAGACAGACTGAAGCTGGACAAgaagactggatctctgaccataaACAACATCGGTCGTAAACTCACTGGAAAATATACATTAGAGATCATCAGGGGCAGTGGAGAAAACATAAGAAGGACATTCACTGTTCTTATTACAGATAATAAGATAGCAGCACAGAAAGGAGCTTCTCAAACTCTGAAGCCTGATACTGAAATACAGAGAGATGATGAGATACAGTGGCTCTTAGGAAATAAAAATGATCTGATTGCTAAAATGACTGGAGTGACCAGAAAGATAACATATCCTGATGAGAGATTCAAAGACAGACTGGAGCTGGACAAgaagactggatctctgaccatcaacaaCATCACTTTTAAACACACCGGAGTTTTTAAAATGAAGATCAGCAGCTGGAGAAGAAACAAAATACAAGTGTTCATTGTTTATATCCCACCGGAGGATAAGATATTCACAGAGGGAGATACAGCTGTTTTACAGAGTGGTGTAGAAATACAGATAGAAGATGAAGTAGAATGGAAGTTTGAAGGTTCTAAGTCTCCAATAGCTAAAATTAAAGATGGACAAATAAAGTTTCCATCTGCTGGTCCAGGTGAGAGATTCAAAGAGACACTGGTTCTGGACAAGAAGACTGGATCTCTGATCATCAAGAACGGCAGACCTGCACATTCTGGGCGTTATTGTCTCCAGATCAAGAATAGCACTGGAGCCCCAATCAGAGCATTCAATGTTGTTTTCCATTCTCCCGCAGAAAACCAAGAGCCTGCTTTATTGCCTGAAGAACAGAAACTATTACCTAGAGATTTTGAGGATATTGTGTATGCGAATGAGAGGACGAGTCCAGTTTAATGAGAGAAGACACGCCCACCAGTGTCAATCACTGTGACCTCATCAACATGTAAAGCTCCAACTACAAACAAACAATCATCTTTCCGCTTTTCAGAGCTTCTAGAATCCGTCCAGTAAAGTAAGAAACAAATCTGTGTTTGATCAGCCGTTAAACTcgcatgtaaaaatattttagatgaactCAAAAATGTGCTGATAAAACACTTTCATGTTGTTTTGTGAATGTTACACATCATATGTTACTCTGTTAGCAGTTTGACCCTCAAAGCTTTGTGTGATTTTAGAAAGTGAGCAGCTTTTATAAGACATTTTATCACAGCAGTGTTACTCTAATCATTTTGTgtgatatttattaattattaattttataattaagaCCAATATCAGGATAATGTCACTGTTTTGGGGTCTCATGTATGAAACTCACATTTTAGAAACACCTTTGACTATCAGTGCTACATTTAGTTTCAGTatattttacacttttattattgAAGTTAATCAGCTGTAacttttatttacagtgttttacttttcatttgaactttaaactttgttttattaTACTTGTTATGATTTACTGTTATTgagtctgttattttactgtcattttattATGCTTTGATATGTTTTTCCGTGACATATTCTAAAGTGAATCTGCTTCTTTATCTAAATCTGATCTGCATGTCAGATTTAGTATATAAAGAACTTTGTATTTATGCTGAAGCACTTAAATTAGCTTTTAACTAAAGAAGCTCTTGTTCAATTTGAGCACTTACTGATGTGATGTCACACTGTTGTGAATTTgcttttgatttattaattattctgttAGTCATTTTTGACCACTGCATGTTCTTAATGAATACATGTCAAATACTTACTAACTGATCATTTGTGTCCCCAAGTTTAGTGGACAAATATTGTTTCAGCTTGTTTTCTAACAACTGTTTTCACACAAAAtgcttgaaaatatatttttgaattcAATTGTTATCCTAGCCAAACATAATAAAGGAAAATTGCG

Function

symbol description
sc:d217 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080303-15 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000079645

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041084 True 2814 mRNA 0.36 8 7896072 8006342

Neighbor

gene id symbol gene type direction distance location
XLOC_020863 si:ch73-44m9.3 coding downstream 86091 7758462 ~ 7809981 (-)
XLOC_020862 si:ch211-59h6.1 coding downstream 193114 7675388 ~ 7702958 (-)
XLOC_020861 AL929276.2 coding downstream 226448 7668434 ~ 7669624 (-)
XLOC_020860 NA coding downstream 244220 7649019 ~ 7651852 (-)
XLOC_020859 BX511034.7 coding downstream 253105 7624599 ~ 7642967 (-)
XLOC_020866 NA coding upstream 118586 8124928 ~ 8126055 (-)
XLOC_020867 NA coding upstream 134269 8140611 ~ 8153399 (-)
XLOC_020868 si:ch73-44m9.3 coding upstream 151032 8157374 ~ 8174244 (-)
XLOC_020869 CABZ01077220.3 coding upstream 233109 8239451 ~ 8250080 (-)
XLOC_020870 NA coding upstream 278592 8284934 ~ 8292299 (-)
XLOC_020857 NA non-coding downstream 273669 7612004 ~ 7622403 (-)
XLOC_020858 BX511034.3 non-coding downstream 278081 7614672 ~ 7617991 (-)
XLOC_020852 BX511034.4 non-coding downstream 453610 7439255 ~ 7442462 (-)
XLOC_020851 NA non-coding downstream 472604 7422884 ~ 7423468 (-)
XLOC_020873 CABZ01061495.2 non-coding upstream 339733 8346075 ~ 8346200 (-)
XLOC_020875 NA non-coding upstream 398819 8405161 ~ 8409081 (-)

Expression


Co-expression Network