G109917



Basic Information


Item Value
gene id G109917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7293040 ~ 7293383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU125262
atattatgtggattatgATTCATGCAAATGTTTTGTAGGGGGTTGATACAGTTTTTGATCCTGACAATcctgacatttcaaagtggaaattacaaactttgaAAGCTTTTttaaaaccttgaatacactgcaGGTTTGCATTTCCTTCTGTGcaggaacattctcagcaacaaGAGAGTgattaaattaagatcctacatctgtatgcgcgcacacgcacacacacacacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU125262 True 255 lncRNA 0.38 2 7293040 7293383

Neighbor


gene id symbol gene type direction distance location
LOC110535004 LOC106596209 coding upstream 213963 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 214065 7030625 ~ 7078975 (+)
mpp6a LOC106594438 coding upstream 298325 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 348997 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 354290 6912089 ~ 6938750 (+)
cbx3b LOC106573104 coding downstream 65522 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 75960 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 202800 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 322527 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 439574 7732957 ~ 7805441 (+)
G109909 NA non-coding upstream 26589 7266035 ~ 7266451 (+)
G109908 NA non-coding upstream 27106 7265728 ~ 7265934 (+)
G109907 NA non-coding upstream 27318 7265394 ~ 7265722 (+)
G109905 LOC106574028 non-coding upstream 29058 7262188 ~ 7263982 (+)
G109901 NA non-coding upstream 38338 7253774 ~ 7254702 (+)
G110139 NA non-coding downstream 18246 7311629 ~ 7311995 (+)
G110153 NA non-coding downstream 28596 7321979 ~ 7322362 (+)
G110175 NA non-coding downstream 42961 7336344 ~ 7336552 (+)
G110177 NA non-coding downstream 44363 7337746 ~ 7338109 (+)
G110180 NA non-coding downstream 48062 7341445 ~ 7341780 (+)
G109821 NA other upstream 152061 7135247 ~ 7140979 (+)
malsu1 malsu1 other upstream 381835 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 424064 6855864 ~ 6868976 (+)
G109020 NA other upstream 659127 6633078 ~ 6633913 (+)
pde11al LOC106573285 other downstream 9645 7282430 ~ 7304709 (+)
G110644 NA other downstream 605213 7898596 ~ 7935137 (+)
G110674 NA other downstream 779983 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1743421 8820359 ~ 9072449 (+)

Expression



Co-expression Network