Gene
RNA
| Item | Value |
|---|---|
| gene id | G110139 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 7311629 ~ 7311995 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein transport protein Sec23A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125530 | True | 273 | lncRNA | 0.38 | 2 | 7311629 | 7311995 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pde11al | LOC106573285 | coding | upstream | 6920 | 7282430 ~ 7304709 (+) |
| LOC110535004 | LOC106596209 | coding | upstream | 232552 | 7067283 ~ 7079077 (+) |
| LOC110535127 | LOC106592104 | coding | upstream | 232654 | 7030625 ~ 7078975 (+) |
| mpp6a | LOC106594438 | coding | upstream | 316914 | 6944265 ~ 6994715 (+) |
| LOC110535156 | LOC106606167 | coding | upstream | 367586 | 6941465 ~ 6944043 (+) |
| cbx3b | LOC106573104 | coding | downstream | 46910 | 7358905 ~ 7369148 (+) |
| snx10b | LOC106593746 | coding | downstream | 57348 | 7369343 ~ 7377095 (+) |
| tax1bp1b | LOC106594183 | coding | downstream | 184188 | 7496183 ~ 7531274 (+) |
| creb5b | LOC106573409 | coding | downstream | 303915 | 7615910 ~ 7706660 (+) |
| chn2 | chn2 | coding | downstream | 420962 | 7732957 ~ 7805441 (+) |
| G109917 | NA | non-coding | upstream | 18246 | 7293040 ~ 7293383 (+) |
| G109909 | NA | non-coding | upstream | 45178 | 7266035 ~ 7266451 (+) |
| G109908 | NA | non-coding | upstream | 45695 | 7265728 ~ 7265934 (+) |
| G109907 | NA | non-coding | upstream | 45907 | 7265394 ~ 7265722 (+) |
| G109905 | LOC106574028 | non-coding | upstream | 47647 | 7262188 ~ 7263982 (+) |
| G110153 | NA | non-coding | downstream | 9984 | 7321979 ~ 7322362 (+) |
| G110175 | NA | non-coding | downstream | 24349 | 7336344 ~ 7336552 (+) |
| G110177 | NA | non-coding | downstream | 25751 | 7337746 ~ 7338109 (+) |
| G110180 | NA | non-coding | downstream | 29450 | 7341445 ~ 7341780 (+) |
| G110182 | NA | non-coding | downstream | 31736 | 7343731 ~ 7344102 (+) |
| G109821 | NA | other | upstream | 170650 | 7135247 ~ 7140979 (+) |
| malsu1 | malsu1 | other | upstream | 400424 | 6908511 ~ 6911256 (+) |
| rbm24b | LOC106596654 | other | upstream | 442653 | 6855864 ~ 6868976 (+) |
| G110644 | NA | other | downstream | 586601 | 7898596 ~ 7935137 (+) |
| G110674 | NA | other | downstream | 761371 | 8073366 ~ 8103920 (+) |
| LOC110518388 | LOC106598833 | other | downstream | 1724809 | 8820359 ~ 9072449 (+) |
| LOC110535224 | aif1 | other | downstream | 1909490 | 9221418 ~ 9229025 (+) |
