G110153



Basic Information


Item Value
gene id G110153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7321979 ~ 7322362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU125548
CCTGTCACGTCAGCAGAATAAACACACGCTGTTGCAGGGTGAAAAACAACATCtgaactcattcaaaatacattCTGTTTTCTTTAAACATCAATAATGATCTTCAATCTACAGTGACATCTTGAGGTGAACCCTGTTTTTTCCTTCACATCCCATCTAAGCCCTGGTCCCGAGTGGATCATCAATCTACAGTGACATCTTGAGGTGAACCCTGTTTTTTCCTTCACATCCCATCTAAGCCCTGGTCCCGAGTGGCTCATCAATCTGTGACTGAGCTGAACTCCCTCCTTCGGAGAACTTCAAGGTTCAACACTTCACAGTTACACTTGATTAAAAGTCAATGTTGTATTTACAGGTAGCGAATACAACTTCATTCTTTATGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU125548 True 384 lncRNA 0.57 1 7321979 7322362

Neighbor


gene id symbol gene type direction distance location
pde11al LOC106573285 coding upstream 17270 7282430 ~ 7304709 (+)
LOC110535004 LOC106596209 coding upstream 242902 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 243004 7030625 ~ 7078975 (+)
mpp6a LOC106594438 coding upstream 327264 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 377936 6941465 ~ 6944043 (+)
cbx3b LOC106573104 coding downstream 36543 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 46981 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 173821 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 293548 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 410595 7732957 ~ 7805441 (+)
G110139 NA non-coding upstream 9984 7311629 ~ 7311995 (+)
G109917 NA non-coding upstream 28596 7293040 ~ 7293383 (+)
G109909 NA non-coding upstream 55528 7266035 ~ 7266451 (+)
G109908 NA non-coding upstream 56045 7265728 ~ 7265934 (+)
G109907 NA non-coding upstream 56257 7265394 ~ 7265722 (+)
G110175 NA non-coding downstream 13982 7336344 ~ 7336552 (+)
G110177 NA non-coding downstream 15384 7337746 ~ 7338109 (+)
G110180 NA non-coding downstream 19083 7341445 ~ 7341780 (+)
G110182 NA non-coding downstream 21369 7343731 ~ 7344102 (+)
G110184 NA non-coding downstream 22335 7344697 ~ 7345722 (+)
G109821 NA other upstream 181000 7135247 ~ 7140979 (+)
malsu1 malsu1 other upstream 410774 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 453003 6855864 ~ 6868976 (+)
G110644 NA other downstream 576234 7898596 ~ 7935137 (+)
G110674 NA other downstream 751004 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1714442 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1899123 9221418 ~ 9229025 (+)

Expression



Co-expression Network