G110223


Basic Information

Item Value
gene id G110223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7425546 ~ 7425830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125635
GGCTACAACCACGGCATACCAGTTGCGCTGGCAGTTCTGCTCTTGGTACACTGGTATTGAGGTTGTGCCTGAGTCATGCGGGGTGCAGTATGTCCTCCAATACCTGCAGTCTCGCTTGGATGAGGGCTTGGCAGCCTCTACACTGAGATTTATTTGGCTGCTATATCTGCCTGCCATGTGGGGTGGATGGACAGCCAGTGGGCCGCCATCCCTTGGTCTCCAGGTTTATGAAGGGGGTTCGTCGCCTGCGTCCAGCTAGGACCCGCTCAATGGCGAgctgggatc

Function

NR:

description
tyrosine-protein phosphatase non-receptor type 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125635 True 285 lncRNA 0.51 1 7425546 7425830

Neighbor

gene id symbol gene type direction distance location
snx10b LOC106593746 coding upstream 48451 7369343 ~ 7377095 (+)
cbx3b LOC106573104 coding upstream 56398 7358905 ~ 7369148 (+)
pde11al LOC106573285 coding upstream 120837 7282430 ~ 7304709 (+)
LOC110535004 LOC106596209 coding upstream 346469 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 346571 7030625 ~ 7078975 (+)
tax1bp1b LOC106594183 coding downstream 70353 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 190080 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 307127 7732957 ~ 7805441 (+)
plekha8 plekha8 coding downstream 389420 7815250 ~ 7829304 (+)
LOC110514761 LOC106597212 coding downstream 404393 7830223 ~ 7857449 (+)
G110218 NA non-coding upstream 18687 7405057 ~ 7406859 (+)
G110215 NA non-coding upstream 23350 7401533 ~ 7402196 (+)
G110208 NA non-coding upstream 38907 7385958 ~ 7386639 (+)
G110184 NA non-coding upstream 79824 7344697 ~ 7345722 (+)
G110182 NA non-coding upstream 81444 7343731 ~ 7344102 (+)
G110225 NA non-coding downstream 2300 7428130 ~ 7428618 (+)
G110228 NA non-coding downstream 7506 7433336 ~ 7433548 (+)
G110233 NA non-coding downstream 13480 7439310 ~ 7439581 (+)
G110231 NA non-coding downstream 14640 7440470 ~ 7441060 (+)
G110237 NA non-coding downstream 19706 7445536 ~ 7445801 (+)
G109821 NA other upstream 284567 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 482463 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 514341 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 556570 6855864 ~ 6868976 (+)
G110644 NA other downstream 472766 7898596 ~ 7935137 (+)
G110674 NA other downstream 647536 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1610974 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1795655 9221418 ~ 9229025 (+)

Expression


Co-expression Network