Gene
RNA
| Item | Value |
|---|---|
| gene id | G110269 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 7485241 ~ 7486293 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125689 | True | 580 | lncRNA | 0.35 | 4 | 7485241 | 7486293 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| snx10b | LOC106593746 | coding | upstream | 108146 | 7369343 ~ 7377095 (+) |
| cbx3b | LOC106573104 | coding | upstream | 116093 | 7358905 ~ 7369148 (+) |
| pde11al | LOC106573285 | coding | upstream | 180532 | 7282430 ~ 7304709 (+) |
| LOC110535004 | LOC106596209 | coding | upstream | 406164 | 7067283 ~ 7079077 (+) |
| LOC110535127 | LOC106592104 | coding | upstream | 406266 | 7030625 ~ 7078975 (+) |
| tax1bp1b | LOC106594183 | coding | downstream | 9890 | 7496183 ~ 7531274 (+) |
| creb5b | LOC106573409 | coding | downstream | 129617 | 7615910 ~ 7706660 (+) |
| chn2 | chn2 | coding | downstream | 246664 | 7732957 ~ 7805441 (+) |
| plekha8 | plekha8 | coding | downstream | 328957 | 7815250 ~ 7829304 (+) |
| LOC110514761 | LOC106597212 | coding | downstream | 343930 | 7830223 ~ 7857449 (+) |
| G110265 | NA | non-coding | upstream | 905 | 7482626 ~ 7484336 (+) |
| G110266 | NA | non-coding | upstream | 2876 | 7481908 ~ 7482365 (+) |
| G110237 | NA | non-coding | upstream | 39440 | 7445536 ~ 7445801 (+) |
| G110231 | NA | non-coding | upstream | 44181 | 7440470 ~ 7441060 (+) |
| G110233 | NA | non-coding | upstream | 45660 | 7439310 ~ 7439581 (+) |
| G110276 | NA | non-coding | downstream | 23166 | 7509459 ~ 7509924 (+) |
| G110246 | NA | non-coding | downstream | 32945 | 7519238 ~ 7520196 (+) |
| G110245 | NA | non-coding | downstream | 45470 | 7531763 ~ 7533820 (+) |
| G110284 | NA | non-coding | downstream | 76867 | 7563160 ~ 7563695 (+) |
| G110295 | NA | non-coding | downstream | 95093 | 7581386 ~ 7582221 (+) |
| G109821 | NA | other | upstream | 344262 | 7135247 ~ 7140979 (+) |
| LOC110535156 | LOC106606167 | other | upstream | 542158 | 6941465 ~ 6944043 (+) |
| malsu1 | malsu1 | other | upstream | 574036 | 6908511 ~ 6911256 (+) |
| rbm24b | LOC106596654 | other | upstream | 616265 | 6855864 ~ 6868976 (+) |
| G110644 | NA | other | downstream | 412303 | 7898596 ~ 7935137 (+) |
| G110674 | NA | other | downstream | 587073 | 8073366 ~ 8103920 (+) |
| LOC110518388 | LOC106598833 | other | downstream | 1550511 | 8820359 ~ 9072449 (+) |
| LOC110535224 | aif1 | other | downstream | 1735192 | 9221418 ~ 9229025 (+) |
