Gene
RNA
| Item | Value |
|---|---|
| gene id | G110276 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 7509459 ~ 7509924 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proline-rich protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125697 | True | 223 | lncRNA | 0.48 | 2 | 7509459 | 7509924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| snx10b | LOC106593746 | coding | upstream | 132364 | 7369343 ~ 7377095 (+) |
| cbx3b | LOC106573104 | coding | upstream | 140311 | 7358905 ~ 7369148 (+) |
| pde11al | LOC106573285 | coding | upstream | 204750 | 7282430 ~ 7304709 (+) |
| LOC110535004 | LOC106596209 | coding | upstream | 430382 | 7067283 ~ 7079077 (+) |
| LOC110535127 | LOC106592104 | coding | upstream | 430484 | 7030625 ~ 7078975 (+) |
| creb5b | LOC106573409 | coding | downstream | 105986 | 7615910 ~ 7706660 (+) |
| chn2 | chn2 | coding | downstream | 223033 | 7732957 ~ 7805441 (+) |
| plekha8 | plekha8 | coding | downstream | 305326 | 7815250 ~ 7829304 (+) |
| LOC110514761 | LOC106597212 | coding | downstream | 320299 | 7830223 ~ 7857449 (+) |
| LOC100136727 | LOC100136727 | coding | downstream | 459174 | 7969098 ~ 7971187 (+) |
| G110269 | NA | non-coding | upstream | 23166 | 7485241 ~ 7486293 (+) |
| G110265 | NA | non-coding | upstream | 25123 | 7482626 ~ 7484336 (+) |
| G110266 | NA | non-coding | upstream | 27094 | 7481908 ~ 7482365 (+) |
| G110237 | NA | non-coding | upstream | 63658 | 7445536 ~ 7445801 (+) |
| G110231 | NA | non-coding | upstream | 68399 | 7440470 ~ 7441060 (+) |
| G110246 | NA | non-coding | downstream | 9314 | 7519238 ~ 7520196 (+) |
| G110245 | NA | non-coding | downstream | 21839 | 7531763 ~ 7533820 (+) |
| G110284 | NA | non-coding | downstream | 53236 | 7563160 ~ 7563695 (+) |
| G110295 | NA | non-coding | downstream | 71462 | 7581386 ~ 7582221 (+) |
| G110296 | NA | non-coding | downstream | 72578 | 7582502 ~ 7583000 (+) |
| G109821 | NA | other | upstream | 368480 | 7135247 ~ 7140979 (+) |
| LOC110535156 | LOC106606167 | other | upstream | 566376 | 6941465 ~ 6944043 (+) |
| malsu1 | malsu1 | other | upstream | 598254 | 6908511 ~ 6911256 (+) |
| rbm24b | LOC106596654 | other | upstream | 640483 | 6855864 ~ 6868976 (+) |
| G110644 | NA | other | downstream | 388672 | 7898596 ~ 7935137 (+) |
| G110674 | NA | other | downstream | 563442 | 8073366 ~ 8103920 (+) |
| LOC110518388 | LOC106598833 | other | downstream | 1526880 | 8820359 ~ 9072449 (+) |
| LOC110535224 | aif1 | other | downstream | 1711561 | 9221418 ~ 9229025 (+) |
