G110284



Basic Information


Item Value
gene id G110284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7563160 ~ 7563695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU125705
GGATCTTAGGCAAgattagtctcatcatgccagcGTGGTTGTTCACAGAACCTCCTCCGTTACAAACGTATATCGCTGAAGTAACTGTACAACAACATGTGCTCTGAGTCTATCATTCATTGAAACCACTCCCATGtttaacagtaggcctatatctcTGACCAAACTTCATGTTTAACAGAAGgcctatatctcTGACCAAACTTCATGtttaacagtaggcctatatctcTGACCAAACTTCATGtttaacagtaggcctatatctcTGACCAAACTTCATGtttaacagtaggcctatatctcTGACCAAACTTCATGTTTAACAGAAGGCCTATATCTCTGACCAAACATTGTTACATTATAAAGTATTCTGTAAACGTAAGTCATAAAAATGAACTGTTCACACAGACACTGTTAAAGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU125705 True 425 lncRNA 0.47 2 7563160 7563695

Neighbor


gene id symbol gene type direction distance location
tax1bp1b LOC106594183 coding upstream 31886 7496183 ~ 7531274 (+)
snx10b LOC106593746 coding upstream 186065 7369343 ~ 7377095 (+)
cbx3b LOC106573104 coding upstream 194012 7358905 ~ 7369148 (+)
pde11al LOC106573285 coding upstream 258451 7282430 ~ 7304709 (+)
LOC110535004 LOC106596209 coding upstream 484083 7067283 ~ 7079077 (+)
creb5b LOC106573409 coding downstream 52215 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 169262 7732957 ~ 7805441 (+)
plekha8 plekha8 coding downstream 251555 7815250 ~ 7829304 (+)
LOC110514761 LOC106597212 coding downstream 266528 7830223 ~ 7857449 (+)
LOC100136727 LOC100136727 coding downstream 405403 7969098 ~ 7971187 (+)
G110245 NA non-coding upstream 29340 7531763 ~ 7533820 (+)
G110246 NA non-coding upstream 42964 7519238 ~ 7520196 (+)
G110276 NA non-coding upstream 53236 7509459 ~ 7509924 (+)
G110269 NA non-coding upstream 76867 7485241 ~ 7486293 (+)
G110265 NA non-coding upstream 78824 7482626 ~ 7484336 (+)
G110295 NA non-coding downstream 17691 7581386 ~ 7582221 (+)
G110296 NA non-coding downstream 18807 7582502 ~ 7583000 (+)
G110312 NA non-coding downstream 44211 7607906 ~ 7608275 (+)
G110346 NA non-coding downstream 75193 7638888 ~ 7639259 (+)
G110358 NA non-coding downstream 98891 7662586 ~ 7663099 (+)
G109821 NA other upstream 422181 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 620077 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 651955 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 694184 6855864 ~ 6868976 (+)
G110644 NA other downstream 334901 7898596 ~ 7935137 (+)
G110674 NA other downstream 509671 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1473109 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1657790 9221418 ~ 9229025 (+)

Expression



Co-expression Network