G110296



Basic Information


Item Value
gene id G110296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7582502 ~ 7583000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU125718
CTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACACTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTGAGCAGGAAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTATGAGCAGGAAACAACAGTAACTTTCTTTACACGCTCTGAGCAGGAAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU125718 True 499 lncRNA 0.59 1 7582502 7583000

Neighbor


gene id symbol gene type direction distance location
tax1bp1b LOC106594183 coding upstream 51228 7496183 ~ 7531274 (+)
snx10b LOC106593746 coding upstream 205407 7369343 ~ 7377095 (+)
cbx3b LOC106573104 coding upstream 213354 7358905 ~ 7369148 (+)
pde11al LOC106573285 coding upstream 277793 7282430 ~ 7304709 (+)
LOC110535004 LOC106596209 coding upstream 503425 7067283 ~ 7079077 (+)
creb5b LOC106573409 coding downstream 32910 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 149957 7732957 ~ 7805441 (+)
plekha8 plekha8 coding downstream 232250 7815250 ~ 7829304 (+)
LOC110514761 LOC106597212 coding downstream 247223 7830223 ~ 7857449 (+)
LOC100136727 LOC100136727 coding downstream 386098 7969098 ~ 7971187 (+)
G110295 NA non-coding upstream 281 7581386 ~ 7582221 (+)
G110284 NA non-coding upstream 18807 7563160 ~ 7563695 (+)
G110245 NA non-coding upstream 48682 7531763 ~ 7533820 (+)
G110246 NA non-coding upstream 62306 7519238 ~ 7520196 (+)
G110276 NA non-coding upstream 72578 7509459 ~ 7509924 (+)
G110312 NA non-coding downstream 24906 7607906 ~ 7608275 (+)
G110346 NA non-coding downstream 55888 7638888 ~ 7639259 (+)
G110358 NA non-coding downstream 79586 7662586 ~ 7663099 (+)
G110382 NA non-coding downstream 116061 7699061 ~ 7699560 (+)
G110383 NA non-coding downstream 118499 7701499 ~ 7701703 (+)
G109821 NA other upstream 441523 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 639419 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 671297 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 713526 6855864 ~ 6868976 (+)
G110644 NA other downstream 315596 7898596 ~ 7935137 (+)
G110674 NA other downstream 490366 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1453804 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1638485 9221418 ~ 9229025 (+)

Expression



Co-expression Network