G110332


Basic Information

Item Value
gene id G110332
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7706940 ~ 7707860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125759
AATATGTGTTCTCTGGGTTTGTCTTTGTTCTTATTTGtcttctatttttgtctcatgttttttatctatttttttattttaaatttgtaCTTTAGTTAAAAGGGAGTTTTGCAATTCATGCAGCATTAACCCATGTGGAGTTTTTGTGATGTCATACCTCTGTTAGACCGACACCCCCCACCGGGTCACCGTGGTGACACAGCAACGGGACATGAGCCTCAGACCGTCACCTCTGTGACCCTCCCTAACGTCACCTCTGTGACTATGTCACAAATGGAACATTTTCCTCTATAAAggccactacttttgaccagagccttatgggtaaatgccatttgggatgattaTCTTGTATGTGTGCTTGTGACTGATGGATTGACTAGCAGAGATTGAGTCTGAGTACCACTGTCAGATAAGTATGTGTCAGATAGTTACTGTGTTGAATAGTGCAATGTTCTGGTTACATGTGTAACATACAGGGTATGTAGTGTCAGGTACTTGATCAGATGCTTAGCTAAGAAAGTGTGTGGGATGCTACTGCCTCCacgttgttgatgttgttgtttttaaccaAGTCGAACTGTTGCCATGATATGCTATTACTTGGTTACCTACCGGAATCTGGCGATTCTATTGAATGATGCTCTTTTTCTAGAAAGGACCCTGACTGTTACCCTAGCAACCCATCCATGCTATTTAGAGGGCGTTACATGTAATGAAAGATTGAACGGTGTTGAGAATATGTTCAAATTGAAGCAATACATCCTAAGTATTGTTGTTCTATCAGCCATATTGCCCTGCACTGTGATACCAGCTAGCCGAGGCAGCTATGgaggctgacccctgacctctgtctcctccactctcctggagGCTGTCCCCTGACTGCTGTCTCATCCACTCTCCTGGAGGCTGTCCCCT

Function

NR:

description
glutenin, high molecular weight subunit PW212-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU125759 True 921 lncRNA 0.43 1 7706940 7707860

Neighbor

gene id symbol gene type direction distance location
creb5b LOC106573409 coding upstream 280 7615910 ~ 7706660 (+)
tax1bp1b LOC106594183 coding upstream 175666 7496183 ~ 7531274 (+)
snx10b LOC106593746 coding upstream 329845 7369343 ~ 7377095 (+)
cbx3b LOC106573104 coding upstream 337792 7358905 ~ 7369148 (+)
pde11al LOC106573285 coding upstream 402231 7282430 ~ 7304709 (+)
chn2 chn2 coding downstream 25097 7732957 ~ 7805441 (+)
plekha8 plekha8 coding downstream 107390 7815250 ~ 7829304 (+)
LOC110514761 LOC106597212 coding downstream 122363 7830223 ~ 7857449 (+)
LOC100136727 LOC100136727 coding downstream 261238 7969098 ~ 7971187 (+)
LOC118937630 LOC100136727 coding downstream 277968 7985828 ~ 7988121 (+)
G110383 NA non-coding upstream 5237 7701499 ~ 7701703 (+)
G110382 NA non-coding upstream 7380 7699061 ~ 7699560 (+)
G110358 NA non-coding upstream 43841 7662586 ~ 7663099 (+)
G110346 NA non-coding upstream 67681 7638888 ~ 7639259 (+)
G110312 NA non-coding upstream 98665 7607906 ~ 7608275 (+)
G110324 NA non-coding downstream 1307 7709167 ~ 7709702 (+)
G110330 NA non-coding downstream 3739 7711599 ~ 7712283 (+)
G110322 NA non-coding downstream 5264 7713124 ~ 7714186 (+)
G110329 NA non-coding downstream 101684 7809544 ~ 7809989 (+)
G110405 NA non-coding downstream 130624 7838484 ~ 7839533 (+)
G109821 NA other upstream 565961 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 763857 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 795735 6908511 ~ 6911256 (+)
G110644 NA other downstream 190736 7898596 ~ 7935137 (+)
G110674 NA other downstream 365506 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1328944 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1513625 9221418 ~ 9229025 (+)
G111453 NA other downstream 1622409 9330269 ~ 9331616 (+)

Expression


Co-expression Network