G110409


Basic Information

Item Value
gene id G110409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7849144 ~ 7851587 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125839
TAAACaggtgagatatactgtattaaacaggtgagatatactgtattaaacaggtgagagagatactgtattaaacaggtgagagagatactgtattaaacaggtgagagagaaactgtattaaacaggtgagagagatactgtattaaacaggtgagagagatactgtattaaacaggtgagagagatgctgtattaaacaggtgagagagaaactgtattaaacaggtgagagggatactgtattaaacaggtgagagagatactgtattaaacaggtgagagagatactgtattaaacaggtgagagagactgtattaaacaggtgagagatgctgtattaaacaggtgagagatgctgtattaaacaggtgagagatgctgtattaaacaggtgagagatgctgtattaaa

Function

NR:

description
potassium channel subfamily T member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125839 True 415 lncRNA 0.36 3 7849144 7851587

Neighbor

gene id symbol gene type direction distance location
plekha8 plekha8 coding upstream 19840 7815250 ~ 7829304 (+)
chn2 chn2 coding upstream 43703 7732957 ~ 7805441 (+)
creb5b LOC106573409 coding upstream 142484 7615910 ~ 7706660 (+)
tax1bp1b LOC106594183 coding upstream 317870 7496183 ~ 7531274 (+)
snx10b LOC106593746 coding upstream 472049 7369343 ~ 7377095 (+)
LOC100136727 LOC100136727 coding downstream 117511 7969098 ~ 7971187 (+)
LOC118937630 LOC100136727 coding downstream 134241 7985828 ~ 7988121 (+)
LOC118937631 LOC100136727 coding downstream 155244 8006831 ~ 8014142 (+)
LOC118937632 LOC100136727 coding downstream 166691 8018278 ~ 8020571 (+)
LOC118937633 LOC100136727 coding downstream 174383 8025970 ~ 8028263 (+)
G110405 NA non-coding upstream 9611 7838484 ~ 7839533 (+)
G110329 NA non-coding upstream 39155 7809544 ~ 7809989 (+)
G110322 NA non-coding upstream 134958 7713124 ~ 7714186 (+)
G110330 NA non-coding upstream 136861 7711599 ~ 7712283 (+)
G110324 NA non-coding upstream 139442 7709167 ~ 7709702 (+)
G110642 NA non-coding downstream 20171 7871758 ~ 7872286 (+)
G110646 NA non-coding downstream 28273 7879860 ~ 7904188 (+)
G110660 NA non-coding downstream 60944 7912531 ~ 7981149 (+)
G110673 NA non-coding downstream 203988 8055575 ~ 8138469 (+)
G110702 NA non-coding downstream 278174 8129761 ~ 8132133 (+)
pde11al LOC106573285 other upstream 544499 7282430 ~ 7304709 (+)
G109821 NA other upstream 708165 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 906061 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 937939 6908511 ~ 6911256 (+)
G110644 NA other downstream 47009 7898596 ~ 7935137 (+)
G110674 NA other downstream 221779 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1185217 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1369898 9221418 ~ 9229025 (+)
G111453 NA other downstream 1478682 9330269 ~ 9331616 (+)

Expression


Co-expression Network