Gene
RNA
| Item | Value |
|---|---|
| gene id | G110660 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 7912531 ~ 7981149 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| polysialoglycoprotein-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU126144 | True | 201 | lncRNA | 0.45 | 2 | 7912531 | 7981149 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514761 | LOC106597212 | coding | upstream | 55082 | 7830223 ~ 7857449 (+) |
| plekha8 | plekha8 | coding | upstream | 83227 | 7815250 ~ 7829304 (+) |
| chn2 | chn2 | coding | upstream | 107090 | 7732957 ~ 7805441 (+) |
| creb5b | LOC106573409 | coding | upstream | 205871 | 7615910 ~ 7706660 (+) |
| tax1bp1b | LOC106594183 | coding | upstream | 381257 | 7496183 ~ 7531274 (+) |
| LOC118937630 | LOC100136727 | coding | downstream | 4679 | 7985828 ~ 7988121 (+) |
| LOC118937631 | LOC100136727 | coding | downstream | 25682 | 8006831 ~ 8014142 (+) |
| LOC118937632 | LOC100136727 | coding | downstream | 37129 | 8018278 ~ 8020571 (+) |
| LOC118937633 | LOC100136727 | coding | downstream | 44821 | 8025970 ~ 8028263 (+) |
| LOC110516794 | LOC100136727 | coding | downstream | 52041 | 8033190 ~ 8040571 (+) |
| G110646 | NA | non-coding | upstream | 8343 | 7879860 ~ 7904188 (+) |
| G110642 | NA | non-coding | upstream | 40245 | 7871758 ~ 7872286 (+) |
| G110409 | NA | non-coding | upstream | 60944 | 7849144 ~ 7851587 (+) |
| G110405 | NA | non-coding | upstream | 72998 | 7838484 ~ 7839533 (+) |
| G110329 | NA | non-coding | upstream | 102542 | 7809544 ~ 7809989 (+) |
| G110673 | NA | non-coding | downstream | 74426 | 8055575 ~ 8138469 (+) |
| G110702 | NA | non-coding | downstream | 148612 | 8129761 ~ 8132133 (+) |
| G110751 | NA | non-coding | downstream | 292842 | 8273991 ~ 8274437 (+) |
| G110717 | NA | non-coding | downstream | 303161 | 8284310 ~ 8329229 (+) |
| G110900 | NA | non-coding | downstream | 358762 | 8339911 ~ 8340121 (+) |
| pde11al | LOC106573285 | other | upstream | 607886 | 7282430 ~ 7304709 (+) |
| G109821 | NA | other | upstream | 771552 | 7135247 ~ 7140979 (+) |
| LOC110535156 | LOC106606167 | other | upstream | 969448 | 6941465 ~ 6944043 (+) |
| malsu1 | malsu1 | other | upstream | 1001326 | 6908511 ~ 6911256 (+) |
| G110674 | NA | other | downstream | 92217 | 8073366 ~ 8103920 (+) |
| LOC110518388 | LOC106598833 | other | downstream | 1055655 | 8820359 ~ 9072449 (+) |
| LOC110535224 | aif1 | other | downstream | 1240336 | 9221418 ~ 9229025 (+) |
| G111453 | NA | other | downstream | 1349120 | 9330269 ~ 9331616 (+) |
| G111788 | NA | other | downstream | 1459160 | 9440309 ~ 9444041 (+) |
