G110702


Basic Information

Item Value
gene id G110702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8129761 ~ 8132133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126188
CAGTGATGTTGTTTAATAATGTTTACTCTGAGAGCACACATCCCATCAGTCATCATGCACCTCTGGCTTCAAGACATTGAATTACATTTTcattcagagaaagagagggagagagaagagagagggagagagagagaaagagacactaaCACACCATAGAAtctcacatacactcacacacacacagagcgagagaaagagagagagaaagataaagaaagaaagagagctttCTCTCATACATGATgctatttatttgtttttatcaATAGTACATTTGCTGTAATTTCTTGTTCATTTCCCACGCTAGACTCAGGGGGAAACAGTAGATCTGTTTAAACACGCCCCCATCACCCATCAGTAACACAACAGTTCGCTTGCTCACTGTCACATCTAAGTGAACAATTGGCTGTCCCATCCAACCCTGAGACTGATCCCAGCACAGCAGGGCTGCATAACAAGCTTATAGACAAGTTCCTTGCTCACTGTCACATCTAAGTGAACAATTGGCTGTCCCGTCCAACCCTGAGACTGATCCCAGAGGAAGACACCATGCTGCACAGCAGGGCTGCATAACAGACTTATAGACAAGTTCCCTTCTCACTGATAACATAGCAAGTGTAGACCTACAATACGTTGAAATAAATACCATCTACAGTCTACCATCTAACATAATAAGCTCTGTTGTAGATGAAATAACCACTTTTATTAAGCTCCATCTCAAAGACAATATTGTTTGGTATGTCAGTGTCATACCCAACAACGGTCCAACATACACAACCGTAAACATATAGTAGTACTGTAATGCTTAGCTCGGGGTCAAGAAGGAAGTTGACTTACTTCAGAGAGAGGTCATGACATCAAAACCCATGTCAATGTCTCGTTTACTCTGTCAATTTAAAGCATGTCCACAGCTATTTGTATATTCAAGGATATAGCCCACATGTGTTTATTTTTATGTGGCTTGACCCACTTGCTTTTAGCGTCCCAAATCCTATTGTAAACATAAGGGGATTTAGGTTTTAGCGATAGTGAATGTAGCCCCCTAAAATCCCCTCAAAATCCCCATAAAACCCCCTCACTCACTCAATGAATAGAAATACATTCACTGAATGATCTGCTGTATAGTCTTGATTCATTACATTTCTCCACTGGAAATGAATGCCACTTGATTAAATATGTTTTGCATGTTGATCAATGTAATAGACAAGCAGaatattttttgtttgtaaattcgTGCATTCAAAAACATTAGTAATTTTCAAAGGCCAAAAGAATAGCCAATTCAAAACATGACTATAGGGACAGACAAGCCTAGGATGGGTACAGTACAGTGGTTTTGCCACAGGAGTAGATCATATAATGAATTCATTGCAGATACCATGAAACCCTATGTTTGTAAACGAATGGAGATTTGCCTAGTAGTAAACCTATTACATATCTAAATATTTTGATGTTTATTCGCTCTGACAAACACATTCAGTATGTCAACTGTCAGATTATCAAATTCCCCCAAAGCAGTCTAAAAGCCTGAAATAAACAGCATTTTACGGATTATCCTCCCAAGCTTTGACTCGGATATTCATGGGATCTGAATGTGGTGTACTGTAGTGGCCATGCTTTCCCAATATGGAATGTGGTGTCAATTATACTGTACATTGACATAGAATACTGAATACAAATTGACTTGGGGGTTGGGTCAATTCCTCCAAAAATGACTTCACAATTGTGTTAGGTAGTTGGGTAAATGTATAATGTAGTTGGGTCAAAGTCATGGGATCTTGGTGCACACATACAATATTCTGTCGATTCTCAAATCTGTAGTCTGATCTAATCCTGTCAAATATGACATTTCAGCGCGTTGTGGAGTCCAACGTAGATTTCTCGGTGTCAGAAAGAGTTCATGGCTGTCCATCCTGTCAGGCTTGGATGCCATTTACATTCCAAATGTTGACATTTCGGGAGGCACACATCACTTTATGATGAATCTGAGATGGAAAAATCCCTCATCCCTTTGATTCAAagcaaatgtaaaatgtaaacgGCATTCCAAGTAATGTGTCAGATTAGGAGATAAAGAGCTTTGCTATCAGAGCCTGAAATAACAAGTCACTTGAATACAGTAATTCCCAAGTAATTTACCCTGAATTAGAGATCACCATTCTCCACCAAGACTGCTTCTGTATACACACTTCTTCCTAATAATGCTCTTCATTTAACTGGTGAGGTCTGCAGTATGTTCACAAACTAGGACCTATTTTGCTTTGCTGACCCAAAAATACAGTAGGCTGTTTTTAAAATCTAAGAGTTGCTATAAGgataaatacatttaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126188 True 2334 lncRNA 0.42 2 8129761 8132133

Neighbor

gene id symbol gene type direction distance location
LOC118936929 LOC100136727 coding upstream 76731 8050410 ~ 8053030 (+)
LOC110516794 LOC100136727 coding upstream 89190 8033190 ~ 8040571 (+)
LOC118937633 LOC100136727 coding upstream 101498 8025970 ~ 8028263 (+)
LOC118937632 LOC100136727 coding upstream 109190 8018278 ~ 8020571 (+)
LOC118937631 LOC100136727 coding upstream 115619 8006831 ~ 8014142 (+)
LOC118936503 LOC106605709 coding downstream 306 8132439 ~ 8159036 (+)
LOC110514591 LOC106595161 coding downstream 72967 8205100 ~ 8327730 (+)
LOC118944039 NA coding downstream 103770 8235903 ~ 8262731 (+)
LOC118936502 LOC106574003 coding downstream 348383 8480516 ~ 8505603 (+)
LOC118937640 NA coding downstream 495638 8627771 ~ 8645961 (+)
G110660 NA non-coding upstream 148612 7912531 ~ 7981149 (+)
G110646 NA non-coding upstream 225573 7879860 ~ 7904188 (+)
G110642 NA non-coding upstream 257475 7871758 ~ 7872286 (+)
G110409 NA non-coding upstream 278174 7849144 ~ 7851587 (+)
G110405 NA non-coding upstream 290228 7838484 ~ 7839533 (+)
G110751 NA non-coding downstream 141858 8273991 ~ 8274437 (+)
G110717 NA non-coding downstream 152177 8284310 ~ 8329229 (+)
G110900 NA non-coding downstream 207778 8339911 ~ 8340121 (+)
G110904 NA non-coding downstream 212055 8344188 ~ 8344471 (+)
G110936 NA non-coding downstream 245112 8377245 ~ 8379321 (+)
G110674 NA other upstream 25841 8073366 ~ 8103920 (+)
G110644 NA other upstream 194624 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 423272 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 825116 7282430 ~ 7304709 (+)
G109821 NA other upstream 988782 7135247 ~ 7140979 (+)
LOC110518388 LOC106598833 other downstream 904671 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1089352 9221418 ~ 9229025 (+)
G111453 NA other downstream 1198136 9330269 ~ 9331616 (+)
G111788 NA other downstream 1308176 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 1569907 9701990 ~ 9742723 (+)

Expression


Co-expression Network