G110991


Basic Information

Item Value
gene id G110991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8464002 ~ 8466672 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126555
ACAAAACTAAATGCACTGAAAAAGGTTTCAGTGTATGGGCTTAAGACACGGAGTTAAAAAAATAGCAATCTGAATACTGAGGATTGGATTTGGCAGAAAAAACAAATGTAATCCCTTCCAACCTTAACTAAAATTAGCGTAAATACAGCTAAAATAAACGTAAATAAATGTAATGAAAAACCAGGGGGATTTAATGTAACATTGTAACATAAAATATAAAAGGTATGAAACCGTGTGACAACTGGAACTGGAAGTAACTCTACTGTATGTTGCCTCACTATTAATGTCAAATCAATAACAAGCGCTATCACATAGTGTCTAACAGAAAAACCCAAAGTAACAGACCTCAATATAGTTTCTGCTGTTTGGTCTTAAGAAATGATGTCAAAGGAAGCAGATATCTGTTAGACAAATTATCAAAACAAAACCTTTATAAAACTCATGTAAAGATACATATGGTTAATATGgctgagatatgttcgtTTGCATCCTGTGTAACAGAATCTGTCCATACACTGGTTCTGGCTTTGTATGAACAACATCTAGCAATATAGTTTAAGTATCTAGCCCCAATTAATAATTAAATATAGCTATAATTATGTTTACGACATGAAGTGAACTCTAAGAAGAAACTCTGACAAAGTGGGCAAAGACACGACACAATACAAGAACAAGAACAAACATTGACTTCATCTTCGCCTCCCCCTCTGCATCGTAACAAGGACCTCCATATTCAAAGACAGTGGGAACTGCAGTAAGCTTGATCAAAGGGCCTCTGTGGCCTCAGTTCTACAGTTGTTACCCATTTGAGCTCTCCAGCATGCTCATTCTTCTCCTCAGTGGGGttctatggtttggggaaggctgAGACCCTGAGGATCTCCAGACAGTTGACTGCGATTAGCGCCCCGGTCAGCTGCCTCCACTGTCTGGTGATTGGGCTCTTCATCTTGTCTAGGGCCAGGTGGAGGTCCTGGATCATGTCCTGGTAGCCCTCCCCGTACAACTGGCTCCATGAGTACAGGAAGTCATAGGCAGGTTTCCAC

Function

NR:

description
PREDICTED: metastasis-associated in colon cancer protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU126555 True 1046 lncRNA 0.40 2 8464002 8466672

Neighbor

gene id symbol gene type direction distance location
LOC110514591 LOC106595161 coding upstream 136272 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 201271 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 304966 8132439 ~ 8159036 (+)
LOC118936929 LOC100136727 coding upstream 410972 8050410 ~ 8053030 (+)
LOC110516794 LOC100136727 coding upstream 423431 8033190 ~ 8040571 (+)
LOC118936502 LOC106574003 coding downstream 13844 8480516 ~ 8505603 (+)
LOC118937640 NA coding downstream 161099 8627771 ~ 8645961 (+)
LOC110518388 LOC106598833 coding downstream 353687 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 623888 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 636840 9103512 ~ 9105845 (+)
G110981 NA non-coding upstream 41751 8421960 ~ 8422251 (+)
G110936 NA non-coding upstream 84681 8377245 ~ 8379321 (+)
G110904 NA non-coding upstream 119531 8344188 ~ 8344471 (+)
G110900 NA non-coding upstream 123881 8339911 ~ 8340121 (+)
G110717 NA non-coding upstream 134773 8284310 ~ 8329229 (+)
G110994 NA non-coding downstream 158 8466830 ~ 8467029 (+)
G111015 NA non-coding downstream 55368 8522040 ~ 8522763 (+)
G111067 NA non-coding downstream 74944 8541616 ~ 8541876 (+)
G111071 NA non-coding downstream 81883 8548555 ~ 8548896 (+)
G111165 NA non-coding downstream 182067 8648739 ~ 8648943 (+)
G110674 NA other upstream 360082 8073366 ~ 8103920 (+)
G110644 NA other upstream 528865 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 757513 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1159357 7282430 ~ 7304709 (+)
G109821 NA other upstream 1323023 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 754813 9221418 ~ 9229025 (+)
G111453 NA other downstream 863597 9330269 ~ 9331616 (+)
G111788 NA other downstream 973637 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 1235368 9701990 ~ 9742723 (+)

Expression


Co-expression Network