G111044


Basic Information

Item Value
gene id G111044
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8522002 ~ 8522761 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126623
ggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggggtaccggtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtaccgagtcagtgtggaggctatatacagggggtaccggtaccgagtcaatgtggaggctatatacagggggtaccggtaccgagtcagtgtggaggctatatacagggggtaccggtaccgagtcagtgtggaggctatatacagggggtaccggtaccaagtcagtgtggaggctatatacagggg
>TU126626
gctatatacaggggggtaccggtacagagtcaatgtggaggctatatacaggggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggggtaccggtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacaggggggtaccggtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtaccgagtcagtgtggaggctatatacagggggtaccggtaccgagtcaatgtggaggctatatacagggggtaccggtaccgagtcagtgtggaggctatatacagggggtaccggtaccgagtcagtgtggaggctatatacagggggtaccggtaccaagtcagtgtggaggctatatacagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126623 False 550 TUCP 0.52 2 8522002 8522709
TU126626 True 642 TUCP 0.52 3 8522002 8522761

Neighbor

gene id symbol gene type direction distance location
LOC110506629 LOC106573674 coding downstream 8641 8507579 ~ 8513361 (-)
LOC118936301 LOC106595809 coding downstream 50480 8466107 ~ 8471522 (-)
LOC118937639 LOC106573719 coding downstream 92682 8423811 ~ 8429320 (-)
LOC100136714 twst2 coding downstream 126526 8393785 ~ 8395476 (-)
LOC110516569 LOC106595628 coding downstream 397843 8088064 ~ 8124159 (-)
LOC110535184 LOC106605879 coding upstream 170375 8693136 ~ 8752164 (-)
LOC110519098 LOC106594466 coding upstream 247120 8769881 ~ 8782987 (-)
LOC110516599 LOC106606020 coding upstream 268875 8791636 ~ 8802003 (-)
LOC110514444 LOC108270036 coding upstream 281441 8804202 ~ 8819077 (-)
LOC110506642 LOC106606082 coding upstream 552012 9074773 ~ 9087920 (-)
G111047 LOC106574003 non-coding downstream 16398 8500104 ~ 8505604 (-)
G111017 NA non-coding downstream 100318 8420930 ~ 8421684 (-)
G110962 NA non-coding downstream 124892 8396762 ~ 8397110 (-)
G110935 NA non-coding downstream 144967 8376644 ~ 8377035 (-)
G110928 NA non-coding downstream 160692 8360900 ~ 8361310 (-)
G111055 NA non-coding upstream 562 8523323 ~ 8523546 (-)
G111111 NA non-coding upstream 79160 8601921 ~ 8602255 (-)
G111135 NA non-coding upstream 79564 8602325 ~ 8639765 (-)
G111143 NA non-coding upstream 90202 8612963 ~ 8624946 (-)
G111144 NA non-coding upstream 91419 8614180 ~ 8615636 (-)
G110896 NA other downstream 196322 8324960 ~ 8325680 (-)
LOC118937629 LOC106595628 other downstream 429177 7907425 ~ 8092825 (-)
G111650 NA other upstream 527528 9050289 ~ 9050798 (-)
G111659 NA other upstream 544851 9067612 ~ 9068062 (-)
G111855 NA other upstream 916601 9439362 ~ 9439938 (-)

Expression


Co-expression Network