XLOC_020875



Basic Information


Item Value
gene id XLOC_020875
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8405161 ~ 8409081 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042333
AGTTCATAATTCTCTTAGCATGGCTTGTCTTGCTTTAGGTtagatttgtatatttttctggGATACTACTTTTTTCTGAGTCAAAGTGACTGTCAGATTTAGCTGGAAACCGCAGCAATATGAGGATCATTTTAGGGATCATTCTGTTTCTACTATCAACATGCGGTGTGTTTTGTGCTGAAATCAATGTGCAAGTATCAGTGATGGAGGGACAGACTGTGACTCTTAACACTGATATTAATGATATAAAGGAAATCACTCGAATAATGTGGAGGTTTGAAACTTTACGCATTGCTGAATTCAATAACAACAAAACCACTTATGTCAATGACCCTGAGAGATTCAACAGACTGAAGCTGAACAGTCAGACTGGAACTCTGACCATCATGAACATCAGAACCACAGACACTGGACTTTATAAAGCAGAGATCAACCACAACACTGGCACTTCAAAGTGGTTATTCAATGTTACTCTCAGTagtgagttgtttttttttctgtaaactctCATCAGTCAAttttagttttacagtttttaGCACTCTTATAGAGTTGCAGCTTTACAATATGACAGGTGACAGAACTTGCTTCACAAAAAGCAAGTGTGTTTCTGTAGGAATTTATTTATGAACCACCATAAAAGGCTCAAACTTTTTGGTTAACACTTGAGCGTTAGTCAACGTACATCAACTGTAGATTTCTGCATGTATGTATCAGATTAAACTTCAGTTGTTAATTTTGCTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042333 True 744 lncRNA 0.36 3 8405161 8409081

Neighbor


gene id symbol gene type direction distance location
XLOC_020874 CABZ01061498.1 coding downstream 16483 8380715 ~ 8388678 (-)
XLOC_020872 CABZ01061495.1 coding downstream 51775 8337699 ~ 8353386 (-)
XLOC_020873 CABZ01061495.2 coding downstream 58961 8346075 ~ 8346200 (-)
XLOC_020871 CABZ01077218.1 coding downstream 98418 8295097 ~ 8306743 (-)
XLOC_020870 NA coding downstream 112862 8284934 ~ 8292299 (-)
XLOC_020876 NA coding upstream 18854 8427935 ~ 8494949 (-)
XLOC_020877 NA coding upstream 30738 8439819 ~ 8444311 (-)
XLOC_020878 CABZ01061508.1 coding upstream 37699 8446780 ~ 8455462 (-)
XLOC_020879 si:ch73-27e22.4 coding upstream 87958 8497039 ~ 8501332 (-)
XLOC_020880 si:ch73-27e22.3 coding upstream 97087 8506168 ~ 8509215 (-)
XLOC_020867 NA non-coding downstream 251762 8140611 ~ 8153399 (-)
XLOC_020866 NA non-coding downstream 279106 8124928 ~ 8126055 (-)
XLOC_020860 NA non-coding downstream 753309 7649019 ~ 7651852 (-)
XLOC_020881 CR974475.1 non-coding upstream 108576 8517657 ~ 8546430 (-)
XLOC_020886 CR450686.3 non-coding upstream 381562 8790643 ~ 8797226 (-)
XLOC_020893 FO393424.4 non-coding upstream 530852 8939933 ~ 8951684 (-)

Expression



Co-expression Network