G111178


Basic Information

Item Value
gene id G111178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8666594 ~ 8667216 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126795
gtagcctagtggttagagcgttggactagtaaccggaaggttgtgagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcccaggccgtcattgaaaataagaatttgttcttaactgacttgcctggttaaataaaggtaaaataaaaaaaataaaaaaaataaaaaaaatatggtcTAATACTGTCCCTCAGGCCCATATTTAGACACGTTGGGAAAGTATTGACTTGTATATCAAAAGGGATATAAAACCATGGATCGATTAGTAATGTGTAGACAAGACTGGTTACAGGCTATAGGCACAACTATAGAATAAATAGCTTTTGCAGAGAAAGCACAGTGCACAGTATGGTAATTGTATAGGGCTACTCTGTCTTAATGACAAAAATCTCACTGTTTGTCTCCTCCAGggctggtttcctggacacagattaaggctAATCCTAGAGTAAAAAGTTCTTTCAATGGACATTCTCAgttgaaagtgctttttagtccaggactaaagttaatctgtgtctgggaaactgcccCACCTAGAGATTTCATTGGTGGATTCCTGAGCCAGTAGATCTGTATAGGGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126795 True 623 lncRNA 0.40 1 8666594 8667216

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 20633 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 160991 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 338864 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 403863 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 507558 8132439 ~ 8159036 (+)
LOC110518388 LOC106598833 coding downstream 153143 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 423344 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 436296 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 439088 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 481957 9149173 ~ 9168951 (+)
G111165 NA non-coding upstream 17651 8648739 ~ 8648943 (+)
G111071 NA non-coding upstream 117698 8548555 ~ 8548896 (+)
G111067 NA non-coding upstream 124718 8541616 ~ 8541876 (+)
G111015 NA non-coding upstream 143831 8522040 ~ 8522763 (+)
G110994 NA non-coding upstream 199565 8466830 ~ 8467029 (+)
G111195 LOC106605879 non-coding downstream 46265 8713481 ~ 8714511 (+)
G111204 NA non-coding downstream 62083 8729299 ~ 8732801 (+)
G111212 NA non-coding downstream 74265 8741481 ~ 8745070 (+)
G111214 NA non-coding downstream 84454 8751670 ~ 8752136 (+)
G111215 NA non-coding downstream 86592 8753808 ~ 8754113 (+)
G110674 NA other upstream 562674 8073366 ~ 8103920 (+)
G110644 NA other upstream 731457 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 960105 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1361949 7282430 ~ 7304709 (+)
G109821 NA other upstream 1525615 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 554269 9221418 ~ 9229025 (+)
G111453 NA other downstream 663053 9330269 ~ 9331616 (+)
G111788 NA other downstream 773093 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 1034824 9701990 ~ 9742723 (+)

Expression


Co-expression Network