G111505


Basic Information

Item Value
gene id G111505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8731349 ~ 8732792 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127211
CTTTTCATTTTGAAGATAATTTTTTGATGTAAAAACCTAAATGTACCGATTTTAAGGTTGcgtcattagatttggggtggggtCTCGAAAAGTTATGGGATCCCAGCTGAAACAGTTTGAATACCACTGCTCTTGTCTAATGTAgtacactatgaagggaatagggtgcatgtgGGATACACtataaaagggaatagggtgccatgtgggatacactataaagggaatagggtgcatgtgggatacactatgaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgggatacactatgaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgtgatacactataaagggaatagggtgcatgtgtgatacactataaagggaatagggtgccatgtgggatacactataaagggaatagggtgccatgtgggatacactataaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgggatacactatgaagggaatagggtgccatgtgggatacactataaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgggatacactataaagggaatagggtgccatgtgggatacactatgaagggaatagggtgccatgtgggatacactatgaagggaatagggtgccatgtgggatacactatgaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgggatacactataaagggaatagggtgcatgtgggatacactataaagggaaaagagTGCCATGTGGGATAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106583847

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127211 True 893 lncRNA 0.43 2 8731349 8732792

Neighbor

gene id symbol gene type direction distance location
LOC110506629 LOC106573674 coding downstream 217988 8507579 ~ 8513361 (-)
LOC118936301 LOC106595809 coding downstream 259827 8466107 ~ 8471522 (-)
LOC118937639 LOC106573719 coding downstream 302029 8423811 ~ 8429320 (-)
LOC100136714 twst2 coding downstream 335873 8393785 ~ 8395476 (-)
LOC110516569 LOC106595628 coding downstream 607190 8088064 ~ 8124159 (-)
LOC110519098 LOC106594466 coding upstream 37089 8769881 ~ 8782987 (-)
LOC110516599 LOC106606020 coding upstream 58844 8791636 ~ 8802003 (-)
LOC110514444 LOC108270036 coding upstream 71410 8804202 ~ 8819077 (-)
LOC110506642 LOC106606082 coding upstream 341981 9074773 ~ 9087920 (-)
LOC110506677 c4 coding upstream 383774 9116566 ~ 9141714 (-)
LOC110535184 LOC106605879 non-coding downstream 33987 8693136 ~ 8752164 (-)
G111181 NA non-coding downstream 59862 8671272 ~ 8671487 (-)
G111179 NA non-coding downstream 60742 8670286 ~ 8670607 (-)
G111170 NA non-coding downstream 77350 8653774 ~ 8653999 (-)
G111156 NA non-coding downstream 91209 8639806 ~ 8640140 (-)
G111508 NA non-coding upstream 5147 8737939 ~ 8738142 (-)
G111514 NA non-coding upstream 17292 8750084 ~ 8750363 (-)
G111516 NA non-coding upstream 21676 8754468 ~ 8755236 (-)
G111529 NA non-coding upstream 45321 8778113 ~ 8779056 (-)
G111533 NA non-coding upstream 51060 8783852 ~ 8784297 (-)
G111044 NA other downstream 208588 8522002 ~ 8522761 (-)
G111047 LOC106574003 other downstream 225745 8500104 ~ 8505604 (-)
G110896 NA other downstream 405669 8324960 ~ 8325680 (-)
G111650 NA other upstream 317497 9050289 ~ 9050798 (-)
G111659 NA other upstream 334820 9067612 ~ 9068062 (-)
G111855 NA other upstream 706570 9439362 ~ 9439938 (-)
G111955 NA other upstream 901745 9634537 ~ 9635130 (-)

Expression


Co-expression Network