Gene
RNA
| Item | Value |
|---|---|
| gene id | G111514 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 8750084 ~ 8750363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protocadherin-20-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU127220 | True | 280 | lncRNA | 0.33 | 1 | 8750084 | 8750363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506629 | LOC106573674 | coding | downstream | 236723 | 8507579 ~ 8513361 (-) |
| LOC118936301 | LOC106595809 | coding | downstream | 278562 | 8466107 ~ 8471522 (-) |
| LOC118937639 | LOC106573719 | coding | downstream | 320764 | 8423811 ~ 8429320 (-) |
| LOC100136714 | twst2 | coding | downstream | 354608 | 8393785 ~ 8395476 (-) |
| LOC110516569 | LOC106595628 | coding | downstream | 625925 | 8088064 ~ 8124159 (-) |
| LOC110519098 | LOC106594466 | coding | upstream | 19518 | 8769881 ~ 8782987 (-) |
| LOC110516599 | LOC106606020 | coding | upstream | 41273 | 8791636 ~ 8802003 (-) |
| LOC110514444 | LOC108270036 | coding | upstream | 53839 | 8804202 ~ 8819077 (-) |
| LOC110506642 | LOC106606082 | coding | upstream | 324410 | 9074773 ~ 9087920 (-) |
| LOC110506677 | c4 | coding | upstream | 366203 | 9116566 ~ 9141714 (-) |
| G111508 | NA | non-coding | downstream | 11942 | 8737939 ~ 8738142 (-) |
| G111505 | NA | non-coding | downstream | 17292 | 8731349 ~ 8732792 (-) |
| LOC110535184 | LOC106605879 | non-coding | downstream | 52722 | 8693136 ~ 8752164 (-) |
| G111181 | NA | non-coding | downstream | 78597 | 8671272 ~ 8671487 (-) |
| G111179 | NA | non-coding | downstream | 79477 | 8670286 ~ 8670607 (-) |
| G111516 | NA | non-coding | upstream | 4105 | 8754468 ~ 8755236 (-) |
| G111529 | NA | non-coding | upstream | 27750 | 8778113 ~ 8779056 (-) |
| G111533 | NA | non-coding | upstream | 33489 | 8783852 ~ 8784297 (-) |
| G111535 | NA | non-coding | upstream | 36869 | 8787232 ~ 8787572 (-) |
| G111044 | NA | other | downstream | 227323 | 8522002 ~ 8522761 (-) |
| G111047 | LOC106574003 | other | downstream | 244480 | 8500104 ~ 8505604 (-) |
| G110896 | NA | other | downstream | 424404 | 8324960 ~ 8325680 (-) |
| G111650 | NA | other | upstream | 299926 | 9050289 ~ 9050798 (-) |
| G111659 | NA | other | upstream | 317249 | 9067612 ~ 9068062 (-) |
| G111855 | NA | other | upstream | 688999 | 9439362 ~ 9439938 (-) |
| G111955 | NA | other | upstream | 884174 | 9634537 ~ 9635130 (-) |
