G111214


Basic Information

Item Value
gene id G111214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8751670 ~ 8752136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126835
gttgtgattctggaggAAGCGACATCCGTCCTTGGCCAGTCTCTGGACCATCTCCAGATGGGACAGGTCTTCCTTGTCGTGCAGGGCACACACACCCCCCGGCTTCAGCGCCGGGGACACAGAGAACATGTACTTCAGGCCACAGTCCCACGACATTACTATAGAGTAGAACCAGCACGgtgtactcctctcctcctctctcacagtGCACtccaaaggtgtgtgtgtgggggatggGCCAGGAAACcttgagtgtgtgtctgtctggctgtttgtctctgtgtgtgtgtctgtgagcgcAGGTGAGTTACGGCCTCCTCTCACTGAGCCAAAGCAGATCCCTGTAGAAGCACCAACAACAGCTCCGGCTGGCTCTCTGGTTGGCCTGCAGATATATagaaatagagagatagagagggctGTGAAACAGCAAGGACTCCAGGTGCCTGTGTTCTATATGCTTAgat

Function

NR:

description
PREDICTED: rap guanine nucleotide exchange factor 5-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126835 True 467 lncRNA 0.54 1 8751670 8752136

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 105709 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 246067 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 423940 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 488939 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 592634 8132439 ~ 8159036 (+)
LOC110518388 LOC106598833 coding downstream 68223 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 338424 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 351376 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 354168 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 397037 9149173 ~ 9168951 (+)
G111212 NA non-coding upstream 6600 8741481 ~ 8745070 (+)
G111204 NA non-coding upstream 18869 8729299 ~ 8732801 (+)
G111195 LOC106605879 non-coding upstream 37159 8713481 ~ 8714511 (+)
G111178 NA non-coding upstream 84454 8666594 ~ 8667216 (+)
G111165 NA non-coding upstream 102727 8648739 ~ 8648943 (+)
G111215 NA non-coding downstream 1672 8753808 ~ 8754113 (+)
G111218 NA non-coding downstream 7568 8759704 ~ 8759996 (+)
G111220 NA non-coding downstream 8995 8761131 ~ 8761350 (+)
G111241 NA non-coding downstream 44147 8796283 ~ 8798144 (+)
G111290 NA non-coding downstream 147550 8899686 ~ 8899958 (+)
G110674 NA other upstream 647750 8073366 ~ 8103920 (+)
G110644 NA other upstream 816533 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1045181 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1447025 7282430 ~ 7304709 (+)
G109821 NA other upstream 1610691 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 469349 9221418 ~ 9229025 (+)
G111453 NA other downstream 578133 9330269 ~ 9331616 (+)
G111788 NA other downstream 688173 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 949904 9701990 ~ 9742723 (+)

Expression


Co-expression Network