G111215


Basic Information

Item Value
gene id G111215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8753808 ~ 8754113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126836
gatAAAAATAATAGAAAGAAAAAgccaaccgttcttttgtattgtgttgtaccatcatctttgaaatgcaagagaaaggccataatgtattattccagcccaggtacaATTTAGATattgaccactagatggcagcagtgtatgtgcaaagttttagtcttatccaattaaccattgcatttctgttcaatgTTTTTTATCAAGACTGctaaaatgtgcctaatttgttgaTGAATAGCTTTTCTTGTTCAAAATTaagcactctcctcaaacaatagcatggtgttctttcactgtaatatctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126836 True 306 lncRNA 0.33 1 8753808 8754113

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 107847 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 248205 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 426078 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 491077 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 594772 8132439 ~ 8159036 (+)
LOC110518388 LOC106598833 coding downstream 66246 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 336447 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 349399 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 352191 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 395060 9149173 ~ 9168951 (+)
G111214 NA non-coding upstream 1672 8751670 ~ 8752136 (+)
G111212 NA non-coding upstream 8738 8741481 ~ 8745070 (+)
G111204 NA non-coding upstream 21007 8729299 ~ 8732801 (+)
G111195 LOC106605879 non-coding upstream 39297 8713481 ~ 8714511 (+)
G111178 NA non-coding upstream 86592 8666594 ~ 8667216 (+)
G111218 NA non-coding downstream 5591 8759704 ~ 8759996 (+)
G111220 NA non-coding downstream 7018 8761131 ~ 8761350 (+)
G111241 NA non-coding downstream 42170 8796283 ~ 8798144 (+)
G111290 NA non-coding downstream 145573 8899686 ~ 8899958 (+)
G111291 NA non-coding downstream 146641 8900754 ~ 8900955 (+)
G110674 NA other upstream 649888 8073366 ~ 8103920 (+)
G110644 NA other upstream 818671 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1047319 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1449163 7282430 ~ 7304709 (+)
G109821 NA other upstream 1612829 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 467372 9221418 ~ 9229025 (+)
G111453 NA other downstream 576156 9330269 ~ 9331616 (+)
G111788 NA other downstream 686196 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 947927 9701990 ~ 9742723 (+)

Expression


Co-expression Network