G111220


Basic Information

Item Value
gene id G111220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8761131 ~ 8761350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126841
AGGTGATCATGTGTGTCAGGTTGGCTGCATCGCCGGTTGCTGAGAGTAACAAATGGCTATTGTCATAAGCAGATAACTTGCTAAAATCCCATAAAATGACAACATTACTAAAGCAGAGGATAACATCAGATGCATGCTAAGTGTACTGGTCTCACTATGAGTCAAGTAATGTGTGTTTACCACAGTTTTGACAAGGCATCATGTTATTACGTCATTCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126841 True 220 lncRNA 0.43 1 8761131 8761350

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 115170 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 255528 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 433401 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 498400 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 602095 8132439 ~ 8159036 (+)
LOC110518388 LOC106598833 coding downstream 59009 8820359 ~ 9072449 (+)
LOC110520725 LOC106605921 coding downstream 329210 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 342162 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 344954 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 387823 9149173 ~ 9168951 (+)
G111218 NA non-coding upstream 1135 8759704 ~ 8759996 (+)
G111215 NA non-coding upstream 7018 8753808 ~ 8754113 (+)
G111214 NA non-coding upstream 8995 8751670 ~ 8752136 (+)
G111212 NA non-coding upstream 16061 8741481 ~ 8745070 (+)
G111204 NA non-coding upstream 28330 8729299 ~ 8732801 (+)
G111241 NA non-coding downstream 34933 8796283 ~ 8798144 (+)
G111290 NA non-coding downstream 138336 8899686 ~ 8899958 (+)
G111291 NA non-coding downstream 139404 8900754 ~ 8900955 (+)
G111293 NA non-coding downstream 142313 8903663 ~ 8903938 (+)
G111310 NA non-coding downstream 182693 8944043 ~ 8944369 (+)
G110674 NA other upstream 657211 8073366 ~ 8103920 (+)
G110644 NA other upstream 825994 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1054642 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1456486 7282430 ~ 7304709 (+)
G109821 NA other upstream 1620152 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 460135 9221418 ~ 9229025 (+)
G111453 NA other downstream 568919 9330269 ~ 9331616 (+)
G111788 NA other downstream 678959 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 940690 9701990 ~ 9742723 (+)

Expression


Co-expression Network