G111293


Basic Information

Item Value
gene id G111293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 8903663 ~ 8903938 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126930
ggtatgtatagtttttgtgtgctctagctAGGGTAGTGGTTCCCAAACATTTTATAGTCCCgcaccccttcaaacattcaacctcagGCTGCGTaccccccctctagcaccagggtcagtcagcacactctcaaatgttgttttttgccatcattgtaagcctgccacacacacactacacactatacgatacatttattaaacataagaatgagtgtgagtttttgtcactccccggctcatgggaagtgacaaagagctcttataaggccaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126930 True 276 lncRNA 0.46 1 8903663 8903938

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 257702 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 398060 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 575933 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 640932 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 744627 8132439 ~ 8159036 (+)
LOC110520725 LOC106605921 coding downstream 186622 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 199574 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 202366 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 245235 9149173 ~ 9168951 (+)
LOC110535199 LOC106606086 coding downstream 271732 9175670 ~ 9189203 (+)
G111291 NA non-coding upstream 2708 8900754 ~ 8900955 (+)
G111290 NA non-coding upstream 3705 8899686 ~ 8899958 (+)
G111241 NA non-coding upstream 105519 8796283 ~ 8798144 (+)
G111220 NA non-coding upstream 142313 8761131 ~ 8761350 (+)
G111218 NA non-coding upstream 143667 8759704 ~ 8759996 (+)
G111310 NA non-coding downstream 40105 8944043 ~ 8944369 (+)
G111315 NA non-coding downstream 49117 8953055 ~ 8953304 (+)
G111319 NA non-coding downstream 54726 8958664 ~ 8959283 (+)
G111330 NA non-coding downstream 72857 8976795 ~ 8977003 (+)
G111333 NA non-coding downstream 80697 8984635 ~ 8985071 (+)
G110674 NA other upstream 799743 8073366 ~ 8103920 (+)
G110644 NA other upstream 968526 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1197174 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1599018 7282430 ~ 7304709 (+)
G109821 NA other upstream 1762684 7135247 ~ 7140979 (+)
LOC110518388 LOC106598833 other downstream 132866 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 317547 9221418 ~ 9229025 (+)
G111453 NA other downstream 426331 9330269 ~ 9331616 (+)
G111788 NA other downstream 536371 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 798102 9701990 ~ 9742723 (+)

Expression


Co-expression Network