G111358


Basic Information

Item Value
gene id G111358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9030026 ~ 9030239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127004
TGAACACCCTGGAGATTTAAATGATGTGTCAGTGCTTTCCAACTGTATCAAACACACCATGACATGGCAGTGAACCCTGCTGCTGCATGCTGAGCACCTCTTGGAATGCAACGCTCACTGCTTCACTATCTCATTCAACAGAGCCATTAAGAAGCACCTTAAAAAGCAGCAGGGTTGTTTAGAGGTcagctctgctcttgagtacagTCATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127004 True 214 lncRNA 0.42 1 9030026 9030239

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 384065 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 524423 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 702296 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 767295 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 870990 8132439 ~ 8159036 (+)
LOC110520725 LOC106605921 coding downstream 60321 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 73273 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 76065 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 118934 9149173 ~ 9168951 (+)
LOC110535199 LOC106606086 coding downstream 145431 9175670 ~ 9189203 (+)
G111350 NA non-coding upstream 14305 9015312 ~ 9015721 (+)
G111349 NA non-coding upstream 15147 9014476 ~ 9014879 (+)
G111348 NA non-coding upstream 15602 9014050 ~ 9014424 (+)
G111344 NA non-coding upstream 22590 9007227 ~ 9007436 (+)
G111342 NA non-coding upstream 23928 9005625 ~ 9006098 (+)
LOC110518388 LOC106598833 non-coding downstream 2857 8820359 ~ 9072449 (+)
G111359 NA non-coding downstream 8084 9038323 ~ 9038528 (+)
G111365 NA non-coding downstream 25045 9055284 ~ 9055822 (+)
G111367 NA non-coding downstream 35307 9065546 ~ 9065912 (+)
G111368 NA non-coding downstream 36142 9066381 ~ 9066666 (+)
G110674 NA other upstream 926106 8073366 ~ 8103920 (+)
G110644 NA other upstream 1094889 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1323537 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1725381 7282430 ~ 7304709 (+)
G109821 NA other upstream 1889047 7135247 ~ 7140979 (+)
LOC110535224 aif1 other downstream 191246 9221418 ~ 9229025 (+)
G111453 NA other downstream 300030 9330269 ~ 9331616 (+)
G111788 NA other downstream 410070 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 671801 9701990 ~ 9742723 (+)

Expression


Co-expression Network