G111359


Basic Information

Item Value
gene id G111359
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9038323 ~ 9038528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127005
GTCACCTAAAGCATTTAGGGGCGGGTTCCCGGACACAGACTAAGACTAGTCCAGGAAACAGCTCCATAGATGTTTCCAACTTGTCCTCTTCCTCCAGAGCACATAGGTTTAGACATCAGGTGTGGATCTACTAACTACACCTTCTGTTCTGTATACACTCAGCAGAACAGCACTAACCAGCTTCACCGTGTTGGTAAAGACTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127005 True 206 lncRNA 0.48 1 9038323 9038528

Neighbor

gene id symbol gene type direction distance location
LOC118937640 NA coding upstream 392362 8627771 ~ 8645961 (+)
LOC118936502 LOC106574003 coding upstream 532720 8480516 ~ 8505603 (+)
LOC110514591 LOC106595161 coding upstream 710593 8205100 ~ 8327730 (+)
LOC118944039 NA coding upstream 775592 8235903 ~ 8262731 (+)
LOC118936503 LOC106605709 coding upstream 879287 8132439 ~ 8159036 (+)
LOC110520725 LOC106605921 coding downstream 52032 9090560 ~ 9101359 (+)
LOC110506654 NA coding downstream 64984 9103512 ~ 9105845 (+)
LOC110520726 LOC106605921 coding downstream 67776 9106304 ~ 9110772 (+)
LOC110534026 LOC106606081 coding downstream 110645 9149173 ~ 9168951 (+)
LOC110535199 LOC106606086 coding downstream 137142 9175670 ~ 9189203 (+)
G111358 NA non-coding upstream 8084 9030026 ~ 9030239 (+)
G111350 NA non-coding upstream 22602 9015312 ~ 9015721 (+)
G111349 NA non-coding upstream 23444 9014476 ~ 9014879 (+)
G111348 NA non-coding upstream 23899 9014050 ~ 9014424 (+)
G111344 NA non-coding upstream 30887 9007227 ~ 9007436 (+)
G111365 NA non-coding downstream 16756 9055284 ~ 9055822 (+)
G111367 NA non-coding downstream 27018 9065546 ~ 9065912 (+)
G111368 NA non-coding downstream 27853 9066381 ~ 9066666 (+)
G111254 NA non-coding downstream 78005 9116533 ~ 9124215 (+)
LOC110518388 LOC106598833 other upstream 422 8820359 ~ 9072449 (+)
G110674 NA other upstream 934403 8073366 ~ 8103920 (+)
G110644 NA other upstream 1103186 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1331834 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1733678 7282430 ~ 7304709 (+)
LOC110535224 aif1 other downstream 182957 9221418 ~ 9229025 (+)
G111453 NA other downstream 291741 9330269 ~ 9331616 (+)
G111788 NA other downstream 401781 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 663512 9701990 ~ 9742723 (+)
LOC118937659 NA other downstream 735675 9773574 ~ 9776807 (+)

Expression


Co-expression Network