G111257


Basic Information

Item Value
gene id G111257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9138410 ~ 9144906 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU126888
aggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcggcgcaagtggCAAATACAATTTGACTTGACATTTTATTTTCAGCACTTTGTAAGGAGCTAGATGTTGTAGGGGGAAACAGTTGATATCAGGATTAAATCTTACTTGGCTAAAATTGTGAAGGTGAACTGTTCAGTGTTCAATAGAAAGTAGCTTTGCTTAGGTATGACGGTCACCTCAAAGCTCGGCAGCActgaaacaaaaaaacatgttcagaacaacaaaacatttcttaTCCTTTCTCCATGTGTaagaaaatgtataaataatagCATGAATACAttttcagtaaaatatttgaagaAAGATTGGCTTTAAACTTGAAATATTCAAATGGTAAATAGAGAGTAAGTTGAGCAAAGGAGATAAAAAGAGAAAATATGAACCAAATTTCTTGACTTGAAATTCTCGAGTAACAGCATTCTTTTCATCTCCTTGGTAATGAGCCACGATCCTCCAGACACCCATtctaaaataaaaacacaccagGTATGATATTAGGTTGTCTTATTATAATCTATTGTTTAAGTAAATCATGTCATCGATTGATCAAATAAGGATAGTTGCACAATATCAGTCAATTAATAGATGCTAACATTGAATAATTGTGAAATTTCCATAGCACATAATATATGACTGTACTCTGAGACATCAGGGATATTAAAAGGGATATTGGTGAATATTCCATCCGTAGCTCTCTTAAGAGTCTTCATTATCCGGTTGCCCGCAGCATTCTACCAAGGAGATACAAATCAGTTACAATACAAATCAGTTACTATTTCACAACTCTTTCAAACATCAAAACAAGCTTTTTGGCATCAGAGATCTCCACCACAATGATAAACATTTCAACACTTCATCAAATGAAATGTAACAACGGAATGTGGTCAAAAATTTCAAGTTTGTACTCACAAAAATAGAGATCTGAAAAACGTCATCATGGGGCTTCATTGAGTGGTTGAGGGTAAATATCCTGTATCTCactggtaaaaaaaaattatCCTAATATAATATCTTAATTGTAAACCTTTGACCAATATTAAAGTTGTACTTGGGCATTTTGACTGGgaggtcctttatctacttccccagagtcagatgccTATAGGTGTCTTAGCAGatacgctagttagcattggctcgtgaaactacctctaacttgcttcatactggacacagacacataaaAATGATACCCatcagttcatctgactctggggggGAAGTAGATAAgggggcctcattgccaaaatcccaagtatccctttaagatcGGGTTCTATTTcatgtagactgtagatgtaCCTTGCTGTGTAGGGTTGTAGATAGGCTGGTCAGTCTGAATGAAGATGTAGCCTCTGTGTTGGGAGACTAGGACCCTCACCATCTTTCTGCCTGTCACCCCATCCATCTCAGCCACCAGCAGAAGATAGGGAATATCCCCAAAGGTGGGCAGCTTGTCCCTTTCTACCTGCAAGGTGGGAAAAACATTGAAATGAAACCAATAAGACCTAGTGTATCTCCTTTTTCTTGTTTGTGATATAGTCTGTATGGTCATTCCTTTTATCAAGGCAAGTCTCACTAAGTCATACCTCTAGTTCCACAGTTTGGATCTGTCCCTCCTCAGTACACACAGTGCTGCTCTTTTGAGACATCAGATGTGTAGTTTCCTCATGCTCCAGGTAAAGGGTAACACGTTTATTCAGGAGGGCTTTACCCAGCTGGACATAAACACGCTCCTTCACCCCCACATGGAACACATTGGGAGCTGAGATAAAGAACCTGAGCCAAGAGAAGGTAGCATTTAGAAGACTGTATCTACCACCCAATACTTTTAAAAGTCTAGAATGTAAAGTATCACTTTAAGGTCAGAGACAAAAACCTAAAGATGTTTTATTCATGTTTGTCAAACACCAGTATATCAAAAGGCTAAATGTGCAAGTCATTCAGAGGCATTGAAGTACTCAGATTAATCTGAGTTGAAACATTAGATTAGAATACAACTAATAGAAATGTCTCgcactgtaaaacatattgtGCTAGTTCCACTTTAAAAAATGTAGGCAACTATTTCCATCAGCTTTTTGAGGATTTCCAACATGAGGTATTTTTAGGTATAATATACTTACATTTTAGTGTTTCACAAACACTAATATATTAAGTCTAGCATAAAAATGACTAAGCGACAACTTAGTGACTAAGAGACAACTAATGACTAAGAGACAACTTCATTTGATCTACTTAATCTTTCTGTTTAGTTACTTTCATTGATCGTGTTAAACAGGGTTTGTGTTAAATATGTCTTTATGTTTTTCATCGCTTGGCATCTTTATCTCCTGAAACAGGAATTGTTGAGAGCAGAGTTTATTCCACTAGCACTAACTGGAGGTAAAGTTGTAAGCATTGTAGCATGATCTAACTAATAGTGAGAATGGGTGGTCACATCATTGAATGTCAATTTGCCCTACGGTTTGGGTATCCGTTCATCTTGATCCATTACACCTCAAAGCATATCAAACTGTTTGATACTAACGTAGAAATGGGATTTTTTGCAAACAACATTGTGTAAAAGTAtcgtaaagttttttaaaaaagAGCCACATGACAAGTTGTTGGAAGAACTTAAAATTCTTTAGTTGAAAGGAAATACTATGATAATTGAGTAAGTTAAACACAATTTTCCTTGTAGTTGTTTTTACACACAAACAGTTGTGTAGATGCTGCATTTATCTTCTGCTGAATTCATTATTTTTTGGGAATAGTATTTTTTGGTTGATTGAACAAGTAATGTAAAGTACTAATTATATTCAAGTAAAGATGACCACTTCTCTTTTTTATGTCAAAACAATGATATTTTGAAGTATAATTGACTAACCACCTGCATCGTTTTTTATAGTGTATGTGACCATGCTAAAACATAAGTACAAGTCAGTTCAAGTTAAAGCTACATGCACATACAGGACACAGGAAGGCACTGATATTGCATGGTGAAATGTTTCATGAAGATATTGTTGAAACATTTACCTGTCCTGTCCATGTACAGACTCAGCAGCCAAAATGAAGAGCACCATAAGACAGACGGGAGAGCCCATGGTTCTTGTTCActgtctctcctcctgctctgtcCACAGACCCTATCTTCACAGTTTTATTCACTCAGCTTATATAGATAgatctctcccttttctctctttctcaatcccCATGTCAATCTCTTAtgctcctcccttcccctctccctctgagACAAAAGTTATGTAATTTGTAGTCACTGCGTGATTGAGGCAGGATGCCACTTACTGTCAATCATCAATAATCAAGAAATTGGCACAACTTCATTGAAAAGACAACTGTTCTATAGTTCTCTTCAACTGATTGGTTCAAGATGGGCAAAAAAGGATTACAACTAAAATAAGAAAGTCCTCTTTGGGATATTATTATTCAAAATACTCTTCACAGGATTAGATCTGGTGGTACAAACAGAGCAGTTTATTTAACTGTTTGGCTTAAGCAGTCAAAACCTGGGGAACTTTGGAGAGGGATTCTTCCATTTCACAATGACAGTCTATGCTCCCATTGGTCAGTGCAATTGTGGTTTTCCCTGAGATCATGTGATTTCTTAGATTTCTGAGGCCTGTTCTAGTCAGTGCCAGCATGATACTATTCTCTGTGTTCTAGTCAGTGCCAGCATGATATTATTCTCTGTGTTCTAGTCAGTGCCAGCATGATACTATTCTCTGTGTTCTAGTCAGTGCCAGCATGATACTATTCTCTGTGTTCTGGTCAGTGCCAGCATGATACTATTCTCTGTGTTCTAGTCAGTGCCAGCATGATACTATTCTCTGTGTTCTAGTCAGTGCCAGCATGATACTGTTCGAGTCAGTGCCATTATAATAATATTCTCTGAGGCAAAGTAAAGCAGTAGTTGCACTTTTAGGATCAACAGTTTGGTGGGTTTTGTTTTATATTCTCTTATTCAATTCCACAATACCTTACAATTTACATGAATCAAAAGCCAATCCTGTTAATTATGTTAGTTAAGGCTATTTTGTTTGTatggtacagtatgtgtgttcttAGATTCCCTGGaccattacatttaaaaaaacaagtgtGTATCTGCTCTGGTTATGGTTATGTGATTCATCCAATGACAAACTGGAAACTTTCACTTGTCTGTTGCTGTTATCACACAAATGCCAGTCGGGTGAATGCCAAACTCCGTCTGTCTAAAGTGTAAATATACCTTTGCCCTATAACTGTCAATATCACAGGCCTGTAATGGCTGCAAAAACTGAGCAACATCAGTTGAGCAATGCATCTGTCTGTGCAACAAACAAAACCTGTTGACATTATCCTGTCCTAGGCCGTGgtgtatgtatatttttttacctttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccttgttcaggggcagaacgacatatttttacattgtcagctcggggatttgaacttgcaaccattcagttactagtccaacgctctgaccactacgctacctgccgccccatataaaGTCACATAATAATTGAATTGGATAAAAGTGCAAGCAGCATTACATATCACTCATTTCTGGCCAGACACAGATACaactctaccactaacatactgtatataggagagtaaaaactctaccactaacatactgtatataggagagtaaaaactataccactaacatactgtatataggagagtagAAACTACcacaaacatactgtatataggaggttaaaaactctaccactaacatactgtatataggagagtaaaaactctaccactaacacactgtatataggagagtaaaaactctaaatctaacatactgtatataggagagtaaaaactctaccactaacatactgtatataggagagtagaaactaccactaacatactgtatataggagagtaaaaactctaccactaacatactgtatataggagagtaaaaactctaccacTAACTGTATATAGGAGGTTaaaaactctaccactaacatactgtatataggagagtaaaaactctaccactaacatactgtatataggagagtaaaaactctaccactaacatactgtatataggagagtaaaaactctaccactaacatactgtatataggagagtagaaactaccactaacatactgtatataggagagtaaaaactctaccactaacatactgtacatagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU126888 True 5407 lncRNA 0.51 2 9138410 9144906

Neighbor

gene id symbol gene type direction distance location
LOC110520726 LOC106605921 coding upstream 27638 9106304 ~ 9110772 (+)
LOC110506654 NA coding upstream 32565 9103512 ~ 9105845 (+)
LOC110520725 LOC106605921 coding upstream 37051 9090560 ~ 9101359 (+)
LOC110518388 LOC106598833 coding upstream 65961 8820359 ~ 9072449 (+)
LOC118937640 NA coding upstream 492449 8627771 ~ 8645961 (+)
LOC110534026 LOC106606081 coding downstream 4267 9149173 ~ 9168951 (+)
LOC110535199 LOC106606086 coding downstream 30764 9175670 ~ 9189203 (+)
LOC118937651 LOC106606075 coding downstream 67168 9212074 ~ 9216058 (+)
LOC110535224 aif1 coding downstream 76512 9221418 ~ 9229025 (+)
LOC110535231 LOC106573472 coding downstream 94990 9239896 ~ 9243612 (+)
G111258 NA non-coding upstream 7256 9124251 ~ 9131154 (+)
G111254 NA non-coding upstream 14195 9116533 ~ 9124215 (+)
G111368 NA non-coding upstream 71744 9066381 ~ 9066666 (+)
G111367 NA non-coding upstream 72498 9065546 ~ 9065912 (+)
G111384 NA non-coding downstream 804 9145710 ~ 9146042 (+)
G111386 NA non-coding downstream 3950 9148856 ~ 9149078 (+)
G111394 NA non-coding downstream 26422 9171328 ~ 9171571 (+)
G111398 NA non-coding downstream 51339 9196245 ~ 9196496 (+)
G110674 NA other upstream 1034490 8073366 ~ 8103920 (+)
G110644 NA other upstream 1203273 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1431921 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1833765 7282430 ~ 7304709 (+)
G111453 NA other downstream 185363 9330269 ~ 9331616 (+)
G111788 NA other downstream 295403 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 557134 9701990 ~ 9742723 (+)
LOC118937659 NA other downstream 629297 9773574 ~ 9776807 (+)

Expression


Co-expression Network