G111394


Basic Information

Item Value
gene id G111394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9171328 ~ 9171571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127050
actttgtttacatactcatctcatttatacatactgtacccgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagttagattacttgttattactgcattgccggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127050 True 244 lncRNA 0.37 1 9171328 9171571

Neighbor

gene id symbol gene type direction distance location
LOC110534026 LOC106606081 coding upstream 2377 9149173 ~ 9168951 (+)
LOC110520726 LOC106605921 coding upstream 60556 9106304 ~ 9110772 (+)
LOC110506654 NA coding upstream 65483 9103512 ~ 9105845 (+)
LOC110520725 LOC106605921 coding upstream 69969 9090560 ~ 9101359 (+)
LOC110518388 LOC106598833 coding upstream 98879 8820359 ~ 9072449 (+)
LOC110535199 LOC106606086 coding downstream 4099 9175670 ~ 9189203 (+)
LOC118937651 LOC106606075 coding downstream 40503 9212074 ~ 9216058 (+)
LOC110535224 aif1 coding downstream 49847 9221418 ~ 9229025 (+)
LOC110535231 LOC106573472 coding downstream 68325 9239896 ~ 9243612 (+)
LOC110520731 LOC106605982 coding downstream 138413 9309984 ~ 9315691 (+)
G111386 NA non-coding upstream 22250 9148856 ~ 9149078 (+)
G111384 NA non-coding upstream 25286 9145710 ~ 9146042 (+)
G111257 NA non-coding upstream 26422 9138410 ~ 9144906 (+)
G111258 NA non-coding upstream 40174 9124251 ~ 9131154 (+)
G111254 NA non-coding upstream 47113 9116533 ~ 9124215 (+)
G111398 NA non-coding downstream 24674 9196245 ~ 9196496 (+)
G111422 NA non-coding downstream 47156 9218727 ~ 9223905 (+)
G111433 NA non-coding downstream 63778 9235349 ~ 9235558 (+)
G111405 NA non-coding downstream 73874 9245445 ~ 9247633 (+)
G110674 NA other upstream 1067408 8073366 ~ 8103920 (+)
G110644 NA other upstream 1236191 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1464839 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1866683 7282430 ~ 7304709 (+)
G111453 NA other downstream 158698 9330269 ~ 9331616 (+)
G111788 NA other downstream 268738 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 530469 9701990 ~ 9742723 (+)
LOC118937659 NA other downstream 602632 9773574 ~ 9776807 (+)

Expression


Co-expression Network