G111398


Basic Information

Item Value
gene id G111398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9196245 ~ 9196496 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127064
catgacataatacagaatgacataatacagaacatcaacagacaagaacagctcaaaggcagaactacatacataaaaaaggcacatgtagcctacatatcagtagatacacacaaactatctaggccaagtaggggagaggcgttgtgctgtgaggtgttgctttatctgttttttggaaccaagtttgctgtttatttgagcaatatgagatggaaggaagttccatgcaataagggctctatataatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127064 True 252 lncRNA 0.38 1 9196245 9196496

Neighbor

gene id symbol gene type direction distance location
LOC110535199 LOC106606086 coding upstream 7042 9175670 ~ 9189203 (+)
LOC110534026 LOC106606081 coding upstream 27294 9149173 ~ 9168951 (+)
LOC110520726 LOC106605921 coding upstream 85473 9106304 ~ 9110772 (+)
LOC110506654 NA coding upstream 90400 9103512 ~ 9105845 (+)
LOC110520725 LOC106605921 coding upstream 94886 9090560 ~ 9101359 (+)
LOC118937651 LOC106606075 coding downstream 15578 9212074 ~ 9216058 (+)
LOC110535224 aif1 coding downstream 24922 9221418 ~ 9229025 (+)
LOC110535231 LOC106573472 coding downstream 43400 9239896 ~ 9243612 (+)
LOC110520731 LOC106605982 coding downstream 113488 9309984 ~ 9315691 (+)
LOC118944051 LOC106573691 coding downstream 158526 9355022 ~ 9358422 (+)
G111394 NA non-coding upstream 24674 9171328 ~ 9171571 (+)
G111386 NA non-coding upstream 47167 9148856 ~ 9149078 (+)
G111384 NA non-coding upstream 50203 9145710 ~ 9146042 (+)
G111257 NA non-coding upstream 51339 9138410 ~ 9144906 (+)
G111258 NA non-coding upstream 65091 9124251 ~ 9131154 (+)
G111422 NA non-coding downstream 22231 9218727 ~ 9223905 (+)
G111433 NA non-coding downstream 38853 9235349 ~ 9235558 (+)
G111405 NA non-coding downstream 48949 9245445 ~ 9247633 (+)
G111414 NA non-coding downstream 79515 9276011 ~ 9276847 (+)
LOC110518388 LOC106598833 other upstream 158344 8820359 ~ 9072449 (+)
G110674 NA other upstream 1092325 8073366 ~ 8103920 (+)
G110644 NA other upstream 1261108 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1489756 7615910 ~ 7706660 (+)
pde11al LOC106573285 other upstream 1891600 7282430 ~ 7304709 (+)
G111453 NA other downstream 133773 9330269 ~ 9331616 (+)
G111788 NA other downstream 243813 9440309 ~ 9444041 (+)
LOC110506952 LOC106606100 other downstream 505544 9701990 ~ 9742723 (+)
LOC118937659 NA other downstream 577707 9773574 ~ 9776807 (+)

Expression


Co-expression Network