G111703 (LOC106596109)


Basic Information

Item Value
gene id G111703
gene name LOC106596109
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9283895 ~ 9304801 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127458
CTGGAATACTCGGATCAATATGCTGTAACTTCTGAAGGCGTCGGGAAACACTTGAATTATGATGGCGGAATAATACCAGGAAGAAAACAGGAAGAAACGTCTCACCTCTCAGAGGCTAGCGCGGTGGGCGAGGCGGACACAGAGGGCAAGCCGAAGCCCAGTGtagcagaggcagagagaagaccGGAGAACAAGCAGAGCTCGGAGGCAGAGATACAACTGGAGAACAAGCAGAGCCCAGAgccagaaacagagagagaaccgGAGAACAAGCCGAGCCCAGAgccagaaacagagagagaaccgGAGAACAAGCCGAGCCCAGAGGCAGCAGCACCGgagccagagagggagaagcCCAGCCAGAAGACCCAGGAGCAGGACTCAGAGCCTGGCTCCACAGAGAGCCCCATCTTCACCACCACCACTGAGGAGGAGCAGCTAGTGAAGCCCCGCCAGCGCACCTCAGCCAGCCGCGGCCTCTCacgcctcttctcctccttcctcaaGCGGCGCTCGCAGTGCTCAGACGTAGAGTGGGCTGAGGTCGAGAAGGCGGAGAAGGACAGGAAAGAGAAGGCAGAGGCTGGAACAAAGGAGGAAAAGTTAGAGCAGGCCaagggggaggagaagaaagaggcagaggaaaggggggagaagaaagaggaggaagaagcaGCAAAGAaagcagagaagaagaaagaggaggaagaagcaGCAAAGAAAGCAAAGAAGAAAGAGGAAGAAGCAGCAAAGAaagcagagaagaagaaagaggaggaagaagcaGCAAAGaaagcagagaagaagaagaagaaagaaggggAAGAAGCAGCAAAGAAAGAGGCagtgaagaagaagaaagaagagaaagaggcagcaaagaaagcagagaagaagaagaaagaggaagaagaggcaGCAAAGaaagcagagaagaagaagaaagaggaggaagaagcaGCAAGGAAAgcgaagaagaaagaggaggaagaggcagcaaagaaagcagagaaggaggaagaggaagcaaagaaagaggaggaagaggcagcaaagaaagcagagaagaagaagaaagaggaggaagcgaagaaagaggagaagaagacgaAAGACGAAGAGGAGTcagcagagaaagaggagaagaagaaaggggaggaaaagacaacaaaaaaaacgcAAAAGGggaagaagaaagagaaagaaaataaagaggaggagaaggggaagaagAACGAGGCGAATAAAGAGGTAAAGAAGAACGAGGAGAATAAAGAGTTAAAGAAGAAAAAACGGAAGGGCAAAAAGAAAGCAGGGGAGGAGCACAAAGCAGGGGAGCAGTCCACAACAGAGGTGCAGGTGAAAGCCCCCATCGCGGCCCCGGAGCCAGAGCTCAGAGCAGAGGCGGAGGGGGAGGCTGAacaggagaggcaggaggagccGGTAGAGGACCAGGACCATCACTCCATCAGCAGTGCAGAGACACAGGTGagtgagggagacagacacagtgaacTTCTCACCTAGGGCATGGGTGCACAACTCTGTTACTTGGGGAATGCTATCCTGCTGGGTTTTTTTTGTTCTGATTTAGATTGTGGGAGACAGCTTTTGCAGTGCGCAAAAAACAAAAATGCAGAATTATCAtacctacactgaacaaaaatataaacgcaacatgtgaagtgttggtcccatgtttcatgagctgaaataaaagctcccagaaatgttccatatgcacaaaatgcttattttcTCTCAAATGGTATGCACAAATTGGTTTTACATCCCtgatagtgagcatttctcctttgtcaagataattcatccacctgacaggtgtggtataatcaagaagttgattaaagagcatgatcattacacaggtgcaccttgtgctagggacaataaaaggcc

Function

NR:

description
PREDICTED: protein 4.1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127458 True 1923 lncRNA 0.49 4 9283895 9304801

Neighbor

gene id symbol gene type direction distance location
LOC110534043 LOC106606076 coding downstream 63622 9215383 ~ 9220273 (-)
LOC110534035 LOC106573444 coding downstream 72462 9188928 ~ 9211433 (-)
LOC110506677 c4 coding downstream 142181 9116566 ~ 9141714 (-)
LOC110506642 LOC106606082 coding downstream 195975 9074773 ~ 9087920 (-)
LOC110514444 LOC108270036 coding downstream 464818 8804202 ~ 8819077 (-)
LOC110506813 LOC106573659 coding upstream 11052 9315853 ~ 9321654 (-)
LOC118937655 pon2 coding upstream 17959 9322760 ~ 9328762 (-)
LOC110520732 LOC106605979 coding upstream 25470 9330271 ~ 9349305 (-)
LOC110512181 LOC106605978 coding upstream 88145 9392946 ~ 9403493 (-)
LOC118937662 NA coding upstream 541729 9846044 ~ 9847233 (-)
G111734 NA non-coding downstream 7264 9274220 ~ 9276631 (-)
LOC110510828 LOC106606088 non-coding downstream 25343 9245445 ~ 9284745 (-)
G111732 NA non-coding downstream 44987 9238646 ~ 9238908 (-)
G111731 NA non-coding downstream 46325 9236227 ~ 9237570 (-)
G111725 aif1 non-coding downstream 55671 9221244 ~ 9228224 (-)
G111706 NA non-coding upstream 24322 9329123 ~ 9330126 (-)
G111758 NA non-coding upstream 67834 9372635 ~ 9372867 (-)
G111777 NA non-coding upstream 120432 9425233 ~ 9425519 (-)
G111780 NA non-coding upstream 123640 9428441 ~ 9428663 (-)
G111781 NA non-coding upstream 124341 9429142 ~ 9429354 (-)
G111659 NA other downstream 215833 9067612 ~ 9068062 (-)
G111650 NA other downstream 233097 9050289 ~ 9050798 (-)
LOC110519098 LOC106594466 other downstream 511075 8769881 ~ 8782987 (-)
LOC110535184 LOC106605879 other downstream 547497 8693136 ~ 8752164 (-)
G111044 NA other downstream 761134 8522002 ~ 8522761 (-)
G111855 NA other upstream 134561 9439362 ~ 9439938 (-)
G111955 NA other upstream 329736 9634537 ~ 9635130 (-)
G112066 NA other upstream 456499 9761300 ~ 9761665 (-)
G112076 LOC105018850 other upstream 474210 9779011 ~ 9780455 (-)
LOC110493960 LOC106606059 other upstream 695929 10000730 ~ 10007883 (-)

Expression


Co-expression Network