G111451


Basic Information

Item Value
gene id G111451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9322870 ~ 9324339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127133
ACTCATATAGCCTCTCCCAGTCCTCCTTGCAtgagtttccctggcaacaacattttaataaatctaACCTCCCTCTGACAGCAGTAACCATCTTATCAGCAATTAAAAGCTCAGAAGTGGGTTTAACTGAAACTTGACCTGTCATCACAAGTATGAACGAGTGTAAGTATCTTCTGATAGGTGgctggtttcatcaggtctgtgacagccttgtgttctcagaaaaccagATAACCACGGTGGGATCCAGACAGGAGGAGTCTGAATGTAGACGCCTTCTGATAGTGTCTGAAGGTCACATCACTCAAAAACagattttaacacacacacacacacagaggtctccTGAAGAGGAGACCTTACAGTTTACCATAAGATAATTTATTAACCCTTTAAAAGGTATAAGGCCTTGGTTTAACCCTCTTCAttagtaacaagaacatttcccaggacatgtcttatatgggcaaaAAGCTTAAATgtttgttaatctaactgcactgtccaatttacagtaGTGTaaacttacattttttattaccatatcatttttgtatgttctctatagttatgttaattgaccaattcggcaaatttgggcagacttgaaacaacattttgaacagtaatgcaacggttcattggatcagtctaaaactttgtacatacactgctgccatctagtgaaaTTGCACCTAGACTCCTAAGTGAGATATTGGCCTTTctattgcatttcaaagatgcaataaaaaatacatgtttttttccccctttgtattatcttttaccagatctaatgtgttatattctcctacatcaatttcacatttccacacacttcaaagtgtttcctttcaaatggtatcaataatatgcatatccttgcttcaggtcctgagctacaggcagttatatttgggtatgtcattttaggcaaaaaaaaaTAACAGTCAGATTATTCTTATCAAGTCATTTCTCCTGTCATTTATCAACTTTTATACAACATTACTATGTATTGTATTGTTACAGGTCTTGTTCAGTGCACCAGCGTTATCTTTGACATATCATTTTGTCAACTTTATTGCAAATCTAACTTCCTGTGATTAGACAGAGCATGCAATGAATGaactttaaaatatatttttttacttatcaACTTGAACCCCACAGGCCACGGCAGAATTCAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127133 True 1188 lncRNA 0.35 2 9322870 9324339

Neighbor

gene id symbol gene type direction distance location
LOC110520731 LOC106605982 coding upstream 7179 9309984 ~ 9315691 (+)
LOC110535231 LOC106573472 coding upstream 79258 9239896 ~ 9243612 (+)
LOC110535224 aif1 coding upstream 94570 9221418 ~ 9229025 (+)
LOC118937651 LOC106606075 coding upstream 107730 9212074 ~ 9216058 (+)
LOC110535199 LOC106606086 coding upstream 133667 9175670 ~ 9189203 (+)
LOC118944051 LOC106573691 coding downstream 30683 9355022 ~ 9358422 (+)
LOC110519250 mroh1 coding downstream 120851 9445190 ~ 9482500 (+)
LOC110506885 LOC106573706 coding downstream 224363 9548702 ~ 9551644 (+)
LOC110506952 LOC106606100 coding downstream 377651 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 420527 9744866 ~ 9757901 (+)
G111446 NA non-coding upstream 14393 9308226 ~ 9308477 (+)
G111404 NA non-coding upstream 37271 9284520 ~ 9285599 (+)
G111417 NA non-coding upstream 44513 9277532 ~ 9278357 (+)
G111414 NA non-coding upstream 46023 9276011 ~ 9276847 (+)
G111405 NA non-coding upstream 75237 9245445 ~ 9247633 (+)
G111454 NA non-coding downstream 4769 9329108 ~ 9330101 (+)
G111453 NA non-coding downstream 5930 9330269 ~ 9331616 (+)
G111460 NA non-coding downstream 25440 9349779 ~ 9350032 (+)
G111477 NA non-coding downstream 67425 9391764 ~ 9392169 (+)
G111778 NA non-coding downstream 102904 9427243 ~ 9427965 (+)
LOC110518388 LOC106598833 other upstream 284969 8820359 ~ 9072449 (+)
G110674 NA other upstream 1218950 8073366 ~ 8103920 (+)
G110644 NA other upstream 1387733 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1616381 7615910 ~ 7706660 (+)
G111788 NA other downstream 115970 9440309 ~ 9444041 (+)
LOC118937659 NA other downstream 449864 9773574 ~ 9776807 (+)
G112697 NA other downstream 1487179 10811518 ~ 10826063 (+)

Expression


Co-expression Network