G111706


Basic Information

Item Value
gene id G111706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9329123 ~ 9330126 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127463
AGCCTAACGTATTATGTAATGGAGTCTAAACAACAAATGttttctattttatttaacctttatttaactaggctaggcagttaagaacaaattcttatttgcaatgacgtcctaccccagccaaaccctcccctaacccggatgacgcagtgccaattgtgcgccaccctatgggactcccgatcacggccggttgtgatacagcccgggatcaaaccagggtctgtagtgacacctctagcactgagaggcagtgccttagaccactgcgccactgaAGCTTAAATTCACTGGCACTAATGCCATGGAATTTGTAAAATATAAAACAGTTTGGACCTTGCAAACAGATTTAAGTGAGAATGAGTACTTTGGTGTTCAAGTTCAAGAAGGGGTAATTAATTGGGTTACTTCGCATTTTATTTGTCTCAAGGAAAAAAGCCCAAAAATGTTTCCCACACAACAGTATTACACACTGAGCATTGTTGCATGGTGACCTATCGCCACCTTCCTACTGCGTTGATACCAGGATATATTATTATTGATTTCCACTACTGCGTTGATACCAGGATATATTATTATTGATTTCCACTACGGTATTGATAACAGGATATGTTGTATTCTGTTCTATGAGTGATTTCAGCTGTTCATGTGCAGATTGAGATTTTAAAATCAAATTCACTATTGTCCTGAAATATGTTCTATTGGTTCTGGGGGGAGAGTCTGTAATTGATTGAATAGCCTATAATGTAAGGTAATATTCTGGTACCAAGGAAAAGTCTACTATATCACTGACATCAGTGTATGCACTAATAATGTATCTAAGCCCTGGATTGCTGACCCTCtcctattggccattgagaggctttgaagccaccatATTGGCTCTCCCCAGtgggagcagtcctccataggaatgaatggaattctacagtatttcaattcaaTGTTTCAAGGAAAAAAAATgcatgtatttatgtattttttttcttgtgTGGACAGTAACG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597293

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU127463 True 1004 lncRNA 0.46 1 9329123 9330126

Neighbor

gene id symbol gene type direction distance location
LOC118937655 pon2 coding downstream 361 9322760 ~ 9328762 (-)
LOC110506813 LOC106573659 coding downstream 7469 9315853 ~ 9321654 (-)
LOC118944050 LOC106593475 coding downstream 26708 9284288 ~ 9302415 (-)
LOC110510828 LOC106606088 coding downstream 44378 9245445 ~ 9284745 (-)
LOC110534043 LOC106606076 coding downstream 108850 9215383 ~ 9220273 (-)
LOC110520732 LOC106605979 coding upstream 145 9330271 ~ 9349305 (-)
LOC110512181 LOC106605978 coding upstream 62820 9392946 ~ 9403493 (-)
LOC118937662 NA coding upstream 516404 9846044 ~ 9847233 (-)
LOC110507310 LOC106595913 coding upstream 580344 9910470 ~ 9913331 (-)
LOC110493960 LOC106606059 coding upstream 670610 10000730 ~ 10007883 (-)
G111703 LOC106596109 non-coding downstream 24322 9283895 ~ 9304801 (-)
G111734 NA non-coding downstream 52492 9274220 ~ 9276631 (-)
G111732 NA non-coding downstream 90215 9238646 ~ 9238908 (-)
G111731 NA non-coding downstream 91553 9236227 ~ 9237570 (-)
G111758 NA non-coding upstream 42509 9372635 ~ 9372867 (-)
G111777 NA non-coding upstream 95107 9425233 ~ 9425519 (-)
G111780 NA non-coding upstream 98315 9428441 ~ 9428663 (-)
G111781 NA non-coding upstream 99016 9429142 ~ 9429354 (-)
G111782 NA non-coding upstream 99260 9429386 ~ 9429682 (-)
G111659 NA other downstream 261061 9067612 ~ 9068062 (-)
G111650 NA other downstream 278325 9050289 ~ 9050798 (-)
LOC110519098 LOC106594466 other downstream 556303 8769881 ~ 8782987 (-)
LOC110535184 LOC106605879 other downstream 592725 8693136 ~ 8752164 (-)
G111044 NA other downstream 806362 8522002 ~ 8522761 (-)
G111855 NA other upstream 109236 9439362 ~ 9439938 (-)
G111955 NA other upstream 304411 9634537 ~ 9635130 (-)
G112066 NA other upstream 431174 9761300 ~ 9761665 (-)
G112076 LOC105018850 other upstream 448885 9779011 ~ 9780455 (-)

Expression


Co-expression Network