G111477


Basic Information

Item Value
gene id G111477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9391764 ~ 9392169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127183
ATTAACACTGTCTGTCACTCCAGCTGCATCACTGGTGGTCCTAATAACCCATTAACACTGTCTGTCACTCCAGCTGCATCACTGGTGGTCCTAATAACCCATTAACACTGTCTGTCACTCCAGCTGCATCACCAGTGGTCCTAATAACCTATTAACACTGTCTGTCACTCCAGCAGCATCACCGGTGGTCCTAATAACCCATTAACACTGTCTGTCACTCCAGCAGCATCACCAGTGGTCCTAATAACCTATTAACACTGTCTGTCACTCCAGCTGCATCACTGGTGGTCCTAATAACCCATTAACACTGTCTGTCACTCCAGCAGCATCACCGGTGGTCCTAATAACCTATTAACGCTGTCTGTCACTCCAGCAGCATCACCGGTGGTCCTAATAAACCATTAAC

Function

NR:

description
PREDICTED: tyrosine-protein kinase RYK isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127183 True 406 lncRNA 0.48 1 9391764 9392169

Neighbor

gene id symbol gene type direction distance location
LOC118944051 LOC106573691 coding upstream 33342 9355022 ~ 9358422 (+)
LOC110520731 LOC106605982 coding upstream 76073 9309984 ~ 9315691 (+)
LOC110535231 LOC106573472 coding upstream 148152 9239896 ~ 9243612 (+)
LOC110535224 aif1 coding upstream 163464 9221418 ~ 9229025 (+)
LOC118937651 LOC106606075 coding upstream 176624 9212074 ~ 9216058 (+)
LOC110519250 mroh1 coding downstream 53021 9445190 ~ 9482500 (+)
LOC110506885 LOC106573706 coding downstream 156533 9548702 ~ 9551644 (+)
LOC110506952 LOC106606100 coding downstream 309821 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 352697 9744866 ~ 9757901 (+)
LOC110520735 LOC106573422 coding downstream 366159 9758328 ~ 9785173 (+)
G111460 NA non-coding upstream 41732 9349779 ~ 9350032 (+)
G111453 NA non-coding upstream 60148 9330269 ~ 9331616 (+)
G111454 NA non-coding upstream 61663 9329108 ~ 9330101 (+)
G111451 NA non-coding upstream 67425 9322870 ~ 9324339 (+)
G111446 NA non-coding upstream 83287 9308226 ~ 9308477 (+)
G111778 NA non-coding downstream 35074 9427243 ~ 9427965 (+)
G111785 NA non-coding downstream 44431 9436600 ~ 9436829 (+)
G111786 NA non-coding downstream 46468 9438637 ~ 9439444 (+)
G111840 NA non-coding downstream 209590 9601759 ~ 9602403 (+)
LOC110518388 LOC106598833 other upstream 353863 8820359 ~ 9072449 (+)
G110674 NA other upstream 1287844 8073366 ~ 8103920 (+)
G110644 NA other upstream 1456627 7898596 ~ 7935137 (+)
G111788 NA other downstream 48140 9440309 ~ 9444041 (+)
LOC118937659 NA other downstream 382034 9773574 ~ 9776807 (+)
G112697 NA other downstream 1419349 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1848563 11227497 ~ 11243074 (+)

Expression


Co-expression Network