G111785


Basic Information

Item Value
gene id G111785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9436600 ~ 9436829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127562
gttacgttacagctttattctaaaatggattacattttaaaacatcctcagtaatctacacacaataccccataatgacaaagcaaaaaacaaacaaccctttgctctgagactcaaaattgagctcaggtgcatccggtttaCATTGaccctccttgagatgtttctacaacttgattggagtccatctgtggtaaattcaattgattggacatgatttagaaaggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127562 True 230 lncRNA 0.45 1 9436600 9436829

Neighbor

gene id symbol gene type direction distance location
LOC118944051 LOC106573691 coding upstream 78178 9355022 ~ 9358422 (+)
LOC110520731 LOC106605982 coding upstream 120909 9309984 ~ 9315691 (+)
LOC110535231 LOC106573472 coding upstream 192988 9239896 ~ 9243612 (+)
LOC110535224 aif1 coding upstream 208300 9221418 ~ 9229025 (+)
LOC118937651 LOC106606075 coding upstream 221460 9212074 ~ 9216058 (+)
LOC110519250 mroh1 coding downstream 8361 9445190 ~ 9482500 (+)
LOC110506885 LOC106573706 coding downstream 111873 9548702 ~ 9551644 (+)
LOC110506952 LOC106606100 coding downstream 265161 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 308037 9744866 ~ 9757901 (+)
LOC110520735 LOC106573422 coding downstream 321499 9758328 ~ 9785173 (+)
G111778 NA non-coding upstream 8635 9427243 ~ 9427965 (+)
G111477 NA non-coding upstream 44431 9391764 ~ 9392169 (+)
G111460 NA non-coding upstream 86568 9349779 ~ 9350032 (+)
G111453 NA non-coding upstream 104984 9330269 ~ 9331616 (+)
G111454 NA non-coding upstream 106499 9329108 ~ 9330101 (+)
G111786 NA non-coding downstream 1808 9438637 ~ 9439444 (+)
G111840 NA non-coding downstream 164930 9601759 ~ 9602403 (+)
G111937 NA non-coding downstream 183283 9620112 ~ 9620393 (+)
G111954 NA non-coding downstream 197714 9634543 ~ 9634819 (+)
LOC110518388 LOC106598833 other upstream 398699 8820359 ~ 9072449 (+)
G110674 NA other upstream 1332680 8073366 ~ 8103920 (+)
G110644 NA other upstream 1501463 7898596 ~ 7935137 (+)
G111788 NA other downstream 3480 9440309 ~ 9444041 (+)
LOC118937659 NA other downstream 337374 9773574 ~ 9776807 (+)
G112697 NA other downstream 1374689 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1803903 11227497 ~ 11243074 (+)

Expression


Co-expression Network