G111788


Basic Information

Item Value
gene id G111788
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9440309 ~ 9444041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127567
ccggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggaataccggtacagagtcaatgtggaggctatatacagggggataccgtacagagtcaatgtggaggctatatacaggggataccggtacagagtcaatgtggaggctatatacagggggataccggtacagagtcaatgtggaggctatatacagggggataccggtacagagtcaatgtggaggctatatacaggg
>TU127568
ccggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggataccggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggatatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggataccggtacagagtcaatgtggaggctatatacagggggataccggtacagagtcaatgtggaggctatatacagggggataccggtacagagtcaatgtggaggctatatacaggg
>TU127569
ccggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggataccagtacagagtcaatgtggaggctatatacagggggtaaaggtacagagtcaatgtggaggctatatacaggggataccggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggatatatacagggggtaccggtacagagtcaatgtggaggatatatacagggggataccagtacagagtcaatgtggaggctatatacagggggtaccggtacagagacaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggataccagtacagagtcaatgtggaggctatatacagggggataccggtacagagtcaatgtggaggctatatacaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127567 False 508 TUCP 0.48 4 9440309 9444041
TU127568 False 509 TUCP 0.49 4 9440309 9444041
TU127569 True 706 TUCP 0.48 3 9440309 9441766

Neighbor

gene id symbol gene type direction distance location
LOC118944051 LOC106573691 coding upstream 81887 9355022 ~ 9358422 (+)
LOC110520731 LOC106605982 coding upstream 124618 9309984 ~ 9315691 (+)
LOC110535231 LOC106573472 coding upstream 196697 9239896 ~ 9243612 (+)
LOC110535224 aif1 coding upstream 212009 9221418 ~ 9229025 (+)
LOC118937651 LOC106606075 coding upstream 225169 9212074 ~ 9216058 (+)
LOC110519250 mroh1 coding downstream 1149 9445190 ~ 9482500 (+)
LOC110506885 LOC106573706 coding downstream 104661 9548702 ~ 9551644 (+)
LOC110506952 LOC106606100 coding downstream 257949 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 300825 9744866 ~ 9757901 (+)
LOC110520735 LOC106573422 coding downstream 314287 9758328 ~ 9785173 (+)
G111786 NA non-coding upstream 865 9438637 ~ 9439444 (+)
G111785 NA non-coding upstream 3480 9436600 ~ 9436829 (+)
G111778 NA non-coding upstream 12344 9427243 ~ 9427965 (+)
G111477 NA non-coding upstream 48140 9391764 ~ 9392169 (+)
G111460 NA non-coding upstream 90277 9349779 ~ 9350032 (+)
G111840 NA non-coding downstream 157718 9601759 ~ 9602403 (+)
G111937 NA non-coding downstream 176071 9620112 ~ 9620393 (+)
G111954 NA non-coding downstream 190502 9634543 ~ 9634819 (+)
G111956 NA non-coding downstream 192084 9636125 ~ 9637610 (+)
G111453 NA other upstream 108693 9330269 ~ 9331616 (+)
LOC110518388 LOC106598833 other upstream 402408 8820359 ~ 9072449 (+)
G110674 NA other upstream 1336389 8073366 ~ 8103920 (+)
G110644 NA other upstream 1505172 7898596 ~ 7935137 (+)
LOC118937659 NA other downstream 330162 9773574 ~ 9776807 (+)
G112697 NA other downstream 1367477 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1796691 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1817513 11260912 ~ 11275480 (+)

Expression


Co-expression Network