G111902


Basic Information

Item Value
gene id G111902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9548662 ~ 9549380 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127719
CGTGAATCCGTAGACTGACGTCGGTCCTGGATCGTCCATAAGAACTCTCAAAATCACTGGATGAAAAATCATCAAGCTTCACCTTTTTAACCAGGAAAGACCTTGGCATGTTTCTGGTGTTGCACCGAAACAACAACCGTCCAGGGCAGGGTTACTGTCCTCATGCAACGCCAATGTAGAGCTGGATATTTAAGGCTGAGCTTTGGATGCCTGGCTGCGTAGAGTAtcagacacccagtcagtcaAACAAACCCCCAGCCAACCCGTAGTGCTTAGGTTTCTCTGTTCTACCTGCAACGCCGTGTCTTGCGAAGGGAAGAAATGCAACTTCAGCACTGGATAGCTCCCTCTCAGAGGCTCGCGTACGACGGAGGAGCGAGCTGAAAGCACCCTGCAGAGTGCGCCTCTTTCTCCCGCGTGCCAATAGAGGATAAATGCAAAAAACACGAGAAAAGCTGCTGTACTGTAAGAGTGCAACAAAAAAATGGGTAGCACTTGTCAGCGTTATTTATTGCTTTCCAATTATTTACAACTCTGATTGGTAGCCTATTTACATTTGGCTGAAAAATAATAATGTCAGTTGATGGACCATCACcgctccacttctctctctctctctctctctctctctctctctctctctctctctctagctctctctctatctctttctcactGTTGCTGcagcctctctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127719 True 697 lncRNA 0.46 2 9548662 9549380

Neighbor

gene id symbol gene type direction distance location
LOC110512181 LOC106605978 coding downstream 145169 9392946 ~ 9403493 (-)
LOC110520732 LOC106605979 coding downstream 199357 9330271 ~ 9349305 (-)
LOC118937655 pon2 coding downstream 219900 9322760 ~ 9328762 (-)
LOC110506813 LOC106573659 coding downstream 227008 9315853 ~ 9321654 (-)
LOC118944050 LOC106593475 coding downstream 246247 9284288 ~ 9302415 (-)
LOC118937662 NA coding upstream 297150 9846044 ~ 9847233 (-)
LOC110507310 LOC106595913 coding upstream 361090 9910470 ~ 9913331 (-)
LOC110493960 LOC106606059 coding upstream 451356 10000730 ~ 10007883 (-)
trnaa-ugc-2 NA coding upstream 549522 10098902 ~ 10098977 (-)
LOC110507454 LOC106584706 coding upstream 712940 10262320 ~ 10267649 (-)
G111880 NA non-coding downstream 66179 9479680 ~ 9482483 (-)
G111856 NA non-coding downstream 106970 9440011 ~ 9441692 (-)
G111784 NA non-coding downstream 118120 9430332 ~ 9430542 (-)
G111782 NA non-coding downstream 118980 9429386 ~ 9429682 (-)
G111781 NA non-coding downstream 119308 9429142 ~ 9429354 (-)
G111944 NA non-coding upstream 73609 9622989 ~ 9623266 (-)
G111952 NA non-coding upstream 81607 9630987 ~ 9631217 (-)
G111961 NA non-coding upstream 93238 9642618 ~ 9642863 (-)
G111962 NA non-coding upstream 93645 9643025 ~ 9643234 (-)
G111963 NA non-coding upstream 94323 9643703 ~ 9644043 (-)
G111855 NA other downstream 108724 9439362 ~ 9439938 (-)
G111659 NA other downstream 480600 9067612 ~ 9068062 (-)
G111650 NA other downstream 497864 9050289 ~ 9050798 (-)
LOC110519098 LOC106594466 other downstream 775842 8769881 ~ 8782987 (-)
LOC110535184 LOC106605879 other downstream 812264 8693136 ~ 8752164 (-)
G111955 NA other upstream 85157 9634537 ~ 9635130 (-)
G112066 NA other upstream 211920 9761300 ~ 9761665 (-)
G112076 LOC105018850 other upstream 229631 9779011 ~ 9780455 (-)
G112491 LOC106584755 other upstream 668772 10184147 ~ 10296999 (-)

Expression


Co-expression Network