G111968 (yo84)


Basic Information

Item Value
gene id G111968
gene name yo84
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9654052 ~ 9654356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127786
gagtaacgccaaggtccttcacagttttattttagacgactgtacaaccattaagattaattgtcagattcaacagaagatctctttgtttcttgggacctagaacaagcttctctgttttgtccgagttcaaaagtagaaagtttgcagccatccacttccttatgtctgaaacacatgcttctagcgagggcaattttggggcttcaccatgtttcattgaaatgtacagctgtgtgtcatccgcatagcagtgaaagttaatgttatgttttcgaatgacatccccaagaggtaaaatatat

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127786 True 305 lncRNA 0.46 1 9654052 9654356

Neighbor

gene id symbol gene type direction distance location
LOC110506885 LOC106573706 coding upstream 102408 9548702 ~ 9551644 (+)
LOC110519250 mroh1 coding upstream 171552 9445190 ~ 9482500 (+)
LOC118944051 LOC106573691 coding upstream 295630 9355022 ~ 9358422 (+)
LOC110520731 LOC106605982 coding upstream 338361 9309984 ~ 9315691 (+)
LOC110535231 LOC106573472 coding upstream 410440 9239896 ~ 9243612 (+)
LOC110506952 LOC106606100 coding downstream 47634 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 90510 9744866 ~ 9757901 (+)
LOC110520735 LOC106573422 coding downstream 103972 9758328 ~ 9785173 (+)
LOC118937659 NA coding downstream 119218 9773574 ~ 9776807 (+)
LOC110520749 LOC106606080 coding downstream 166774 9821130 ~ 9845619 (+)
G111956 NA non-coding upstream 16442 9636125 ~ 9637610 (+)
G111954 NA non-coding upstream 19233 9634543 ~ 9634819 (+)
G111937 NA non-coding upstream 33659 9620112 ~ 9620393 (+)
G111840 NA non-coding upstream 51649 9601759 ~ 9602403 (+)
G111978 NA non-coding downstream 22821 9677177 ~ 9677377 (+)
G111990 NA non-coding downstream 30453 9684809 ~ 9685278 (+)
G111998 NA non-coding downstream 40011 9694367 ~ 9694677 (+)
G112008 NA non-coding downstream 70815 9725171 ~ 9725380 (+)
G111788 NA other upstream 210011 9440309 ~ 9444041 (+)
G111453 NA other upstream 322436 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 425027 9221418 ~ 9229025 (+)
LOC110518388 LOC106598833 other upstream 616151 8820359 ~ 9072449 (+)
G110674 NA other upstream 1550132 8073366 ~ 8103920 (+)
G112697 NA other downstream 1157162 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1586376 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1607198 11260912 ~ 11275480 (+)

Expression


Co-expression Network