G112081


Basic Information

Item Value
gene id G112081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9790115 ~ 9790613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU127909
ctgaccctgataacaattaaccacctgaccctgttaacaactaacctcctgaccctgttaacaactaaccacctgaccctgttaacaactaacaacctgaccctgttaacaactaaccacctgacccggataacaactaacctgctgaccctgataacaactaacctgctgaccctgttaacaactaacctgctgaccctgttaacaactaacctgctgaccctgttaacaactaacaacctgaccctgttaacaactaacaacctgaccctgttaacaactaacctgctgaccctgttaacaactaacaacctgaccctgttaacaactaacctgctgacccggataacaactaacctgctgaccctgttaacaactaacctgctgaccctgttaacaactaacaacctgaccctgttaacaactaacaacctgacccggataacaactaacctgctgaccctgttaacaactaacctgctgaccctgttaacaacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127909 True 499 lncRNA 0.48 1 9790115 9790613

Neighbor

gene id symbol gene type direction distance location
LOC110520735 LOC106573422 coding upstream 4942 9758328 ~ 9785173 (+)
LOC118937659 NA coding upstream 13308 9773574 ~ 9776807 (+)
LOC110520736 LOC106605972 coding upstream 32214 9744866 ~ 9757901 (+)
LOC110506952 LOC106606100 coding upstream 47392 9701990 ~ 9742723 (+)
LOC110506885 LOC106573706 coding upstream 238471 9548702 ~ 9551644 (+)
LOC110520749 LOC106606080 coding downstream 30517 9821130 ~ 9845619 (+)
LOC110507293 LOC106606028 coding downstream 58521 9847951 ~ 9983302 (+)
LOC110493963 LOC106606027 coding downstream 216445 10007058 ~ 10014363 (+)
LOC110507380 LOC106573899 coding downstream 229973 10020205 ~ 10035867 (+)
LOC110520763 pgcp coding downstream 245651 10036264 ~ 10074921 (+)
G112013 NA non-coding upstream 37775 9752104 ~ 9752340 (+)
G112008 NA non-coding upstream 64735 9725171 ~ 9725380 (+)
G112082 NA non-coding downstream 1996 9792609 ~ 9792883 (+)
G112083 NA non-coding downstream 11075 9801688 ~ 9805928 (+)
G112084 NA non-coding downstream 20972 9811585 ~ 9811944 (+)
G112085 NA non-coding downstream 23463 9814076 ~ 9814345 (+)
G112080 NA non-coding downstream 55458 9846071 ~ 9847210 (+)
G111788 NA other upstream 346074 9440309 ~ 9444041 (+)
G111453 NA other upstream 458499 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 561090 9221418 ~ 9229025 (+)
G112697 NA other downstream 1020905 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1450119 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1470941 11260912 ~ 11275480 (+)
G113285 NA other downstream 1624318 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1687363 11477976 ~ 11482741 (+)

Expression


Co-expression Network