G112163



Basic Information


Item Value
gene id G112163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9984898 ~ 9985473 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128017
GACAGCCAAAGCTGTGACAGTGCTTTCCTGTGGTTATGAATGACAGCCAAAGCTGTGACAGTGCTTTCCTGTGGTTATGAATGACAGCCAAAGCTGTGACAGTGCTTTCCTGTGGTTATGAATGACAGACAAAGCTGTGACAGTGCTTTCCTGTGGTTATGAATGACAGACAAAGCTGTCACAGTGCTTTTCTGTGGTTATGAATGACAGCCCATAAGACATGTTTACTGTCCACCCATAAGACATGTGTACTGTCCACCCATAAGACATGCGTACTGTCCACCCATAAGACATGTGTACTGTCCACCCATAAGACATGTGTACTGTCCACCCATAAGACATGCGTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGTGTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGTTTACTGTCCACCCATAAGACATGCGTACTGTCCACCCATA

Function


NR:

description
mucin-2-like isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128017 True 576 lncRNA 0.39 1 9984898 9985473

Neighbor


gene id symbol gene type direction distance location
LOC110507293 LOC106606028 coding upstream 1596 9847951 ~ 9983302 (+)
LOC110520749 LOC106606080 coding upstream 139279 9821130 ~ 9845619 (+)
LOC110520735 LOC106573422 coding upstream 199725 9758328 ~ 9785173 (+)
LOC118937659 NA coding upstream 208091 9773574 ~ 9776807 (+)
LOC110520736 LOC106605972 coding upstream 226997 9744866 ~ 9757901 (+)
LOC110493963 LOC106606027 coding downstream 21585 10007058 ~ 10014363 (+)
LOC110507380 LOC106573899 coding downstream 35113 10020205 ~ 10035867 (+)
LOC110520763 pgcp coding downstream 50791 10036264 ~ 10074921 (+)
LOC110507402 LOC106595324 coding downstream 136972 10122445 ~ 10150796 (+)
LOC110520765 NA coding downstream 187091 10172564 ~ 10184239 (+)
G112162 NA non-coding upstream 240 9984443 ~ 9984658 (+)
G112119 NA non-coding upstream 89289 9894897 ~ 9895609 (+)
G112080 NA non-coding upstream 137688 9846071 ~ 9847210 (+)
G112085 NA non-coding upstream 170553 9814076 ~ 9814345 (+)
G112165 NA non-coding downstream 1840 9987313 ~ 9988353 (+)
G112168 LOC100194703 non-coding downstream 5865 9991338 ~ 9991774 (+)
G112169 NA non-coding downstream 6377 9991850 ~ 9992170 (+)
G112171 NA non-coding downstream 10282 9995755 ~ 9996078 (+)
LOC110506952 LOC106606100 other upstream 261027 9701990 ~ 9742723 (+)
G111788 NA other upstream 540857 9440309 ~ 9444041 (+)
G111453 NA other upstream 653282 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 755873 9221418 ~ 9229025 (+)
G112697 NA other downstream 826045 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1255259 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1276081 11260912 ~ 11275480 (+)
G113285 NA other downstream 1429458 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1492503 11477976 ~ 11482741 (+)

Expression



Co-expression Network