G112168 (LOC100194703)


Basic Information

Item Value
gene id G112168
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9991338 ~ 9991774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128025
attgcaattaattgcaaagtccctctttgccatgcaaatgatctgaatcccccaaaaaacatttccactgcatttcagccctgccacaaaaggatcagctgacatcatgttgtgaagaaggcttcagggcgccaaagaaagtccagcaagcgccaggaccgtctcctaaagttgattcagctgcgggatcggggcaccaccagtacagagcttgctcaggaatggcagcaggcaggtgtgagtgcatctgcacgcacagtgaggtgaagacttttggaggatggcctggtgtcaagaagggcagcgaagaagccacttctctccaagaaaaacatcagggacagactgatattctgcaaaaggtacagggattggactgctgaggaccggggtgaagtaattttctctgatgaatcccctttccgattgtttggggc

Function

NR:

description
transposase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128025 True 437 lncRNA 0.35 1 9991338 9991774

Neighbor

gene id symbol gene type direction distance location
LOC110507293 LOC106606028 coding upstream 8036 9847951 ~ 9983302 (+)
LOC110520749 LOC106606080 coding upstream 145719 9821130 ~ 9845619 (+)
LOC110520735 LOC106573422 coding upstream 206165 9758328 ~ 9785173 (+)
LOC118937659 NA coding upstream 214531 9773574 ~ 9776807 (+)
LOC110520736 LOC106605972 coding upstream 233437 9744866 ~ 9757901 (+)
LOC110493963 LOC106606027 coding downstream 15284 10007058 ~ 10014363 (+)
LOC110507380 LOC106573899 coding downstream 28812 10020205 ~ 10035867 (+)
LOC110520763 pgcp coding downstream 44490 10036264 ~ 10074921 (+)
LOC110507402 LOC106595324 coding downstream 130671 10122445 ~ 10150796 (+)
LOC110520765 NA coding downstream 180790 10172564 ~ 10184239 (+)
G112165 NA non-coding upstream 2985 9987313 ~ 9988353 (+)
G112163 NA non-coding upstream 5865 9984898 ~ 9985473 (+)
G112162 NA non-coding upstream 6680 9984443 ~ 9984658 (+)
G112119 NA non-coding upstream 95729 9894897 ~ 9895609 (+)
G112169 NA non-coding downstream 76 9991850 ~ 9992170 (+)
G112171 NA non-coding downstream 3981 9995755 ~ 9996078 (+)
G112133 NA non-coding downstream 23065 10014839 ~ 10015927 (+)
LOC110506952 LOC106606100 other upstream 267467 9701990 ~ 9742723 (+)
G111788 NA other upstream 547297 9440309 ~ 9444041 (+)
G111453 NA other upstream 659722 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 762313 9221418 ~ 9229025 (+)
G112697 NA other downstream 819744 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1248958 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1269780 11260912 ~ 11275480 (+)
G113285 NA other downstream 1423157 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1486202 11477976 ~ 11482741 (+)

Expression


Co-expression Network