G112171


Basic Information

Item Value
gene id G112171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9995755 ~ 9996078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128028
agcatcaccactctggacagttctgacttagattatgtggacaactgcaaatacctaggtgtctggttagactgtaaactctccttccagactcacattaaacatctccaatcctaaaattaaatctagaatcggcttcccatTTCACaagaaagcatccttcactcatgctgccaaacatgccctcgtaaaactgaccatcctaccgatcctcgacttcggtgatgtcatttacaaaatagcctccaacactctactcaacaaattggatgcagtctatcacagtgccatccattttgtcaccaaagcaccatatactgtact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128028 True 324 lncRNA 0.55 1 9995755 9996078

Neighbor

gene id symbol gene type direction distance location
LOC110507293 LOC106606028 coding upstream 12453 9847951 ~ 9983302 (+)
LOC110520749 LOC106606080 coding upstream 150136 9821130 ~ 9845619 (+)
LOC110520735 LOC106573422 coding upstream 210582 9758328 ~ 9785173 (+)
LOC118937659 NA coding upstream 218948 9773574 ~ 9776807 (+)
LOC110520736 LOC106605972 coding upstream 237854 9744866 ~ 9757901 (+)
LOC110493963 LOC106606027 coding downstream 10980 10007058 ~ 10014363 (+)
LOC110507380 LOC106573899 coding downstream 24508 10020205 ~ 10035867 (+)
LOC110520763 pgcp coding downstream 40186 10036264 ~ 10074921 (+)
LOC110507402 LOC106595324 coding downstream 126367 10122445 ~ 10150796 (+)
LOC110520765 NA coding downstream 176486 10172564 ~ 10184239 (+)
G112169 NA non-coding upstream 3585 9991850 ~ 9992170 (+)
G112168 LOC100194703 non-coding upstream 3981 9991338 ~ 9991774 (+)
G112165 NA non-coding upstream 7402 9987313 ~ 9988353 (+)
G112163 NA non-coding upstream 10282 9984898 ~ 9985473 (+)
G112162 NA non-coding upstream 11097 9984443 ~ 9984658 (+)
G112133 NA non-coding downstream 18761 10014839 ~ 10015927 (+)
G112179 NA non-coding downstream 26178 10022256 ~ 10022505 (+)
G112180 NA non-coding downstream 31957 10028035 ~ 10029544 (+)
LOC110506952 LOC106606100 other upstream 271884 9701990 ~ 9742723 (+)
G111788 NA other upstream 551714 9440309 ~ 9444041 (+)
G111453 NA other upstream 664139 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 766730 9221418 ~ 9229025 (+)
G112697 NA other downstream 815440 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 1244654 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 1265476 11260912 ~ 11275480 (+)
G113285 NA other downstream 1418853 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1481898 11477976 ~ 11482741 (+)

Expression


Co-expression Network