XLOC_020893 (FO393424.4)


Basic Information

Item Value
gene id XLOC_020893
gene name FO393424.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8939933 ~ 8951684 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041119
CTCTGCTGTACAATTTCACATGAGAATCGAACTCCTTTCCACAAATTgaacttttaaaaaacatgtatGTAATCATGTCATTTGTGAGTTTTAATTTTtcaagtttcactttcattcagcaactgcTTCTGTTTTTTTCTGGACAGCATAAACATAATTCACAGATTTCACGATCAGaatcatgaatatttttttaatacaagacAACACTCTAAGTggttctgtcactgtgtttaatcctttctgtgcaagacTGTATGGTATAGTTAATGCCACACACACTGTAGGcctaatgtgttttattttggtagttcattttgaaataaaaatagcaaaatattaattaagagtaacatttttttttgctgggggaaacagctgtgctgatgaggtgaGCACAGAGCAAACAGTAAATAGGGAAAACCAGATTGCTCCTGAAATTGGGGTACAAGTGACACAAGTGTTTCTGTAgcaaaaaactgcaaataatcAGATTTTATAACAATTTATTGATAAGCATACAACTTGTTCTCACGCTTTGCACGGCTGTGGTTTGCTGATTAAATGAAAGATAAAAAAGACTTGTCTTTTTTTCTCAATTAATAATAGTTTCCAACAAAGCCATAtaacatttacactaatacatttactacagaaACACCCTGAGACCTGAGATTATGATCAAACtgattgtttttctatttttttaatcaaacttacaAACTTCAGACTCTCTGATCTCTGCTGGTGCGGGTGCTGCTGCTGGATCTCTGTTGATTGTAGCTGCAGTTGGGATGATTTGGTTctacaggaaaaacaaaagaaCCAACCAATCAGTCCAGACCCATAATGAGGAGGTAACTTATGCTGATCCAACGTTCTACAAGCGAAGTAAATCAAAAGGGagTGTAAAACAGGAGGACGAGGTGGTGTATGCAGGAGTCGTCACAAGACGTTAATCATATTCTCCAGGATGAGTTTCCTCATCATGGCACATGCCCTCTCcgcttttactttattttagttttagtcagtGTCTTTCACAGCTGAAGCCTGTTAAATGTTGAGTTTAACAATTTTTCAATCcatttttccacttttttcttAGCTAAGCATAAGTCACTAAATTGGATTAGACGACTAAAAATGTCTGTGTATTCTTGTGCAAGTAGAAACAGTTAAGGATCTGCAACAAAGTAATTATGATCTGAATCATCTTTCACAAATGTCTCAATGTTTGCAAGGCAGGTTCTCTGTGCAAGCAGTTGGTCACGCTGAGCATATTGATGGGAATTAGCTAGTAATTTACAATATCAGTGCAGCTGCTGCAGTTATATATGTCAGCAAAGTTCCTTGAGCATTTTGTAGATGCTTTATTTTAAATAGGCTTATCTTCtactaaaaatgcttttatttaaaacacaaatgacaaaatgcttatatatataaagcatcttgtcatttgtgtttttaataaaagcattttttagtaGAAGATAAGCCTATTTCCTGAGCTCAGCTAGTGGTTGATCATTAAAGCAGctcaaacgaaaaaaaaaaatgctgtatactaataatataatatttttaaccaTATAATAAAGTTTTGAATGACTCAGTTGCAGTAATTCTAATTGCATGAGTGTAGTAGGCCTATTCGCGTGAATAGATTAGAATTATCTATTAATCTACTTCAGCTATTGAGAATATACAGTACACCactttttactgtagtaaaactcgAATATACTACTAGTATATTTTCAGTAAAGTTAATACAACTGTATGCTGTAACTTTCATTAACAGTCgtaaatagtataatatatacagtattagaGCTTAAGAACActataatatttaatgtaaattactatagtattttttccatGTAATAGTGAACTGGTGCATGATGAGTAAAATGTCTATCTGTAAAGCTACTGATGGTCTAAAAATAAAGACTTGAAACT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117520

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041119 True 1968 lncRNA 0.33 3 8939933 8951684

Neighbor

gene id symbol gene type direction distance location
XLOC_020892 FO393424.3 coding downstream 8840 8929668 ~ 8931093 (-)
XLOC_020891 FO393424.2 coding downstream 29366 8904046 ~ 8910567 (-)
XLOC_020890 CABZ01046432.1 coding downstream 56836 8878680 ~ 8883097 (-)
XLOC_020888 CABZ01046427.1 coding downstream 63234 8843870 ~ 8876699 (-)
XLOC_020889 CABZ01046427.2 coding downstream 79064 8847831 ~ 8860869 (-)
XLOC_020894 FO393424.1 coding upstream 7806 8959490 ~ 8966295 (-)
XLOC_020895 si:ch211-213a13.5 coding upstream 199897 9151581 ~ 9199911 (-)
XLOC_020896 NA coding upstream 324672 9276356 ~ 9305802 (-)
XLOC_020897 NA coding upstream 327094 9278778 ~ 9315172 (-)
XLOC_020898 si:ch211-156p11.1 coding upstream 601996 9553680 ~ 9597261 (-)
XLOC_020886 CR450686.3 non-coding downstream 142707 8790643 ~ 8797226 (-)
XLOC_020881 CR974475.1 non-coding downstream 393503 8517657 ~ 8546430 (-)
XLOC_020876 NA non-coding downstream 444984 8427935 ~ 8494949 (-)
XLOC_020877 NA non-coding downstream 495622 8439819 ~ 8444311 (-)
XLOC_020875 NA non-coding downstream 530852 8405161 ~ 8409081 (-)
XLOC_020901 BX664625.4 non-coding upstream 762530 9714214 ~ 9714331 (-)
XLOC_020902 NA non-coding upstream 800486 9752170 ~ 9774043 (-)
XLOC_020903 BX539307.3 non-coding upstream 872837 9824521 ~ 9826469 (-)

Expression


Co-expression Network