G112471


Basic Information

Item Value
gene id G112471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10145740 ~ 10146374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128398
GGGTACAGTGACTCTGTGTCACATTAAGTACTGTAGTTATGGAAGGCAGCCTGGCTCTCTGAAACCCAGTGTGTCTGAAGagctgcaaagttgcttaggagccaTGAACAGGGCGACCATGTCTATTGGCGCCATCTTGCTatcagatgtgtgtgtattgttatgtattGTTGGATACTACTGCacagttggagctaggaacaccagcatttacttaggtattactgcactgttggagctaggaacaccagcatttagttaggtattactgaactgttggagctaggaacaccagcatttagttaggtattactgaactgttggagc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU128398 True 327 lncRNA 0.45 2 10145740 10146374

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-2 NA coding downstream 46763 10098902 ~ 10098977 (-)
LOC110493960 LOC106606059 coding downstream 138930 10000730 ~ 10007883 (-)
LOC110507310 LOC106595913 coding downstream 232409 9910470 ~ 9913331 (-)
LOC118937662 NA coding downstream 298883 9846044 ~ 9847233 (-)
LOC110512181 LOC106605978 coding downstream 742247 9392946 ~ 9403493 (-)
LOC110507454 LOC106584706 coding upstream 115946 10262320 ~ 10267649 (-)
LOC110507471 LOC106584706 coding upstream 154331 10300705 ~ 10309293 (-)
LOC118944052 NA coding upstream 170404 10316778 ~ 10354245 (-)
LOC110520767 ulk4 coding upstream 255545 10400640 ~ 10611447 (-)
ccka cck-l coding upstream 568931 10715305 ~ 10718380 (-)
G112440 NA non-coding downstream 60993 10083108 ~ 10084747 (-)
G112437 NA non-coding downstream 67540 10077714 ~ 10078200 (-)
G112413 LOC106606032 non-coding downstream 70848 10069149 ~ 10074892 (-)
G112415 NA non-coding downstream 83182 10062186 ~ 10062558 (-)
G112429 NA non-coding downstream 87767 10057617 ~ 10057973 (-)
G112474 NA non-coding upstream 3362 10149736 ~ 10150782 (-)
G112481 NA non-coding upstream 13186 10159560 ~ 10160013 (-)
G112490 NA non-coding upstream 34680 10181054 ~ 10211523 (-)
G112491 LOC106584755 non-coding upstream 37773 10184147 ~ 10296999 (-)
G112496 NA non-coding upstream 40002 10186376 ~ 10294295 (-)
G112076 LOC105018850 other downstream 365285 9779011 ~ 9780455 (-)
G112066 NA other downstream 384075 9761300 ~ 9761665 (-)
G111955 NA other downstream 510610 9634537 ~ 9635130 (-)
G111855 NA other downstream 705802 9439362 ~ 9439938 (-)
G112567 NA other upstream 200097 10346471 ~ 10346935 (-)
G112928 NA other upstream 424068 10570442 ~ 10570808 (-)
G112965 NA other upstream 501891 10648265 ~ 10718658 (-)
eif3h LOC100196680 other upstream 590355 10736729 ~ 10808244 (-)

Expression


Co-expression Network