G112241 (LOC106584755)


Basic Information

Item Value
gene id G112241
gene name LOC106584755
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10183551 ~ 10296699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128119
ACTCGTATTCCTCTGCGGTGGGTCAGGGACTTGGCACCCCATTTTCTTCCTACGGTGAGGGGCGCATTACGGGAGTCAGAGTGTGGGAGACCAAcaacaactattactactactactactactacaactacaacagCAACAACTACATCAGTGGGTTGCAGCTCAGATACGGTAGCAACTGGTCTCCTGTGTTTGGTGGTGAAGGGGGCTTAAAGCAGGAGATTGAGCTGTTTAATGATGAGGCCATCGTTGAGGTGTCTGGGAAGTACAACCCAGCAGACTACATCTGCTACCTGGTGTTAACCACCAACATGGGGCGCACTCTGTCAGCCGGCATGCCCAACCAGGTCTCCTTCAACTTCTACCCATCCAACATGGGCAATGAGCTGAGGATCCTCAGCGGTCGCTTCAACGGTGTTGGAATCACCTCCATCGGAGCCCACTGGGGATTTGTGGACATGGAAGGGGCTGGAAACAGTACTCTGGGAACAGCACTGGAAACAGTAACTCCTATTTATTAGGGGAAAAAAGTATGTCTTGCTCTTTGGGATGGTATCCCAGATACAGATTAAGCCTAATCCTGGACTAGTtactttcaatggagattctccattcaacatgctttttagtccaggagtaAACTTAATCTGGGTCCAGGAAACTGGCCTTATATGATGGACGGATGTTTGACAGACGCTGACAGAACAGTTTTTATTTCACTATCTGTTTGTTATTTCACTTTAATTTCACTGATTGAATTGGAATGTTTTGAGTACTTTGGAAGTACTTTTGAGGTGATTCCTCACTTGAAGCAGTAATAAAATATTTCTTAACATTCAAATTCATTCAGTTCAAATTCTCATGAAGCATCCATTAGATAGGAATATTCAAACAGTCCTGTCAGCTTGGGTCAACATGCGTTGTTATCACATTTTATCACAATAAAGGAAAGATTCATATGGGATATAAAGGATTAATTATATCTTTGATTAATTGAACAATCAAATATTATGGGGAGATAATAGTGTTTCAGGGTGTTTCACCTTCACTATTTTATACACACTGCATTTGTTATTTGTTGATCCTTTTCTGCTACATCTGCTTCTGGACATTTTAATAAAAAGCAGATCTTTAATCACTATATTTCATTGTATTCCTTTTGATAagacaatacatacagtagtgaCCAGAAGCTACGATAAACTAATCTGTCATCTTAACAAACCCTACCTCAATGGTGTCAATAAG

Function

NR:

description
zymogen granule membrane protein 16-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128119 True 1248 lncRNA 0.42 6 10183551 10296699

Neighbor

gene id symbol gene type direction distance location
LOC110507402 LOC106595324 coding upstream 32755 10122445 ~ 10150796 (+)
LOC110520763 pgcp coding upstream 108630 10036264 ~ 10074921 (+)
LOC110507380 LOC106573899 coding upstream 147684 10020205 ~ 10035867 (+)
LOC110493963 LOC106606027 coding upstream 169188 10007058 ~ 10014363 (+)
LOC110507293 LOC106606028 coding upstream 200249 9847951 ~ 9983302 (+)
LOC110535244 ctnnb1 coding downstream 69433 10366101 ~ 10402645 (+)
LOC110507508 LOC106605488 coding downstream 329887 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 735293 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 787662 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 906188 11202887 ~ 11211212 (+)
G112200 NA non-coding upstream 93320 10085984 ~ 10090231 (+)
G112180 NA non-coding upstream 154007 10028035 ~ 10029544 (+)
G112179 NA non-coding upstream 161046 10022256 ~ 10022505 (+)
G112133 NA non-coding upstream 167624 10014839 ~ 10015927 (+)
G112556 NA non-coding downstream 32851 10329550 ~ 10329961 (+)
G112566 NA non-coding downstream 49997 10346696 ~ 10346984 (+)
G112585 NA non-coding downstream 68694 10365393 ~ 10365667 (+)
G112605 NA non-coding downstream 111726 10408425 ~ 10408770 (+)
LOC118937659 NA other upstream 407100 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 459680 9701990 ~ 9742723 (+)
G111788 NA other upstream 739510 9440309 ~ 9444041 (+)
G111453 NA other upstream 851935 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 954526 9221418 ~ 9229025 (+)
G112697 NA other downstream 514819 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 944033 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 964855 11260912 ~ 11275480 (+)
G113285 NA other downstream 1118232 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1181277 11477976 ~ 11482741 (+)

Expression


Co-expression Network