G112556


Basic Information

Item Value
gene id G112556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10329550 ~ 10329961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128509
cctacctatctctctgatttggtcctgccgtacatacctacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggcagggctttctcctatagagctccatttttatggaacggtctgcctacccatgtgagagacgcagactcggtctcaacctttaagtctttactgaagactcatctcttcagtaggtcctatgattgagtgtagtctggcccaggagtgggaaggtgaacggaaaggctctggagcaacgaaccgcccttgctgtctctgcctggccggttcccctctttccactgggattctctgcctctaaccctattacaggggctgagtcactggcttactggggctctctcatgccgtccctggaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128509 True 412 lncRNA 0.53 1 10329550 10329961

Neighbor

gene id symbol gene type direction distance location
LOC110507415 LOC106584755 coding upstream 32958 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 91171 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 109978 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 140435 10186105 ~ 10189115 (+)
LOC110520765 NA coding upstream 145311 10172564 ~ 10184239 (+)
LOC110535244 ctnnb1 coding downstream 36171 10366101 ~ 10402645 (+)
LOC110507508 LOC106605488 coding downstream 296625 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 702031 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 754400 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 872926 11202887 ~ 11211212 (+)
G112273 NA non-coding upstream 28095 10258852 ~ 10301455 (+)
G112241 LOC106584755 non-coding upstream 32851 10183551 ~ 10296699 (+)
G112200 NA non-coding upstream 239319 10085984 ~ 10090231 (+)
LOC110507380 LOC106573899 non-coding upstream 293692 10020205 ~ 10035867 (+)
G112180 NA non-coding upstream 300006 10028035 ~ 10029544 (+)
G112566 NA non-coding downstream 16735 10346696 ~ 10346984 (+)
G112585 NA non-coding downstream 35432 10365393 ~ 10365667 (+)
G112605 NA non-coding downstream 78464 10408425 ~ 10408770 (+)
G112610 NA non-coding downstream 92672 10422633 ~ 10423207 (+)
LOC118937659 NA other upstream 553099 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 605679 9701990 ~ 9742723 (+)
G111788 NA other upstream 885509 9440309 ~ 9444041 (+)
G111453 NA other upstream 997934 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1100525 9221418 ~ 9229025 (+)
G112697 NA other downstream 481557 10811518 ~ 10826063 (+)
fbxo32 fbxo32 other downstream 910771 11227497 ~ 11243074 (+)
elovl4a LOC106606161 other downstream 931593 11260912 ~ 11275480 (+)
G113285 NA other downstream 1084970 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1148015 11477976 ~ 11482741 (+)

Expression


Co-expression Network