G112557



Basic Information


Item Value
gene id G112557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10329618 ~ 10329958 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128510
tccagggacggcatgagagagccccagtaagccagtgactcagcccctgtaatagggttagaggcagagaatcccagtggaaagaggggaaccggccaggcagagacagcaagggcggttcgttgctccagagcctttccgttcaccttcccactcctgggccagactacactcaatcataggacctactgaagagatgagtcttcagtaaagacttaaaggttgagaccgagtctgcgtctctcacatgggtaggcagaccgttccataaaaatggagctctataggagaaagccctgcctccagctgtttgcttagaaattctagggacaattaggagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128510 True 341 lncRNA 0.44 1 10329618 10329958

Neighbor


gene id symbol gene type direction distance location
LOC110507471 LOC106584706 coding downstream 20325 10300705 ~ 10309293 (-)
LOC110507454 LOC106584706 coding downstream 61969 10262320 ~ 10267649 (-)
trnaa-ugc-2 NA coding downstream 230641 10098902 ~ 10098977 (-)
LOC110493960 LOC106606059 coding downstream 322808 10000730 ~ 10007883 (-)
LOC110507310 LOC106595913 coding downstream 416287 9910470 ~ 9913331 (-)
LOC110520767 ulk4 coding upstream 71961 10400640 ~ 10611447 (-)
ccka cck-l coding upstream 385347 10715305 ~ 10718380 (-)
eif3h LOC100196680 coding upstream 406786 10736729 ~ 10808244 (-)
LOC118937678 NA coding upstream 429401 10759359 ~ 10762238 (-)
LOC110512108 rad21 coding upstream 481555 10811513 ~ 10826012 (-)
G112491 LOC106584755 non-coding downstream 32619 10184147 ~ 10296999 (-)
G112496 NA non-coding downstream 35323 10186376 ~ 10294295 (-)
G112492 NA non-coding downstream 35440 10235620 ~ 10294178 (-)
G112532 NA non-coding downstream 49079 10258879 ~ 10280539 (-)
G112490 NA non-coding downstream 118095 10181054 ~ 10211523 (-)
G112559 NA non-coding upstream 134 10330092 ~ 10330324 (-)
G112586 NA non-coding upstream 35500 10365458 ~ 10365667 (-)
G112875 NA non-coding upstream 62000 10391958 ~ 10392200 (-)
G112876 NA non-coding upstream 62321 10392279 ~ 10392498 (-)
G112076 LOC105018850 other downstream 549163 9779011 ~ 9780455 (-)
G112066 NA other downstream 567953 9761300 ~ 9761665 (-)
G111955 NA other downstream 694488 9634537 ~ 9635130 (-)
G112567 NA other upstream 16513 10346471 ~ 10346935 (-)
G112928 NA other upstream 240484 10570442 ~ 10570808 (-)
G112965 NA other upstream 318307 10648265 ~ 10718658 (-)
G113096 NA other upstream 691083 11021041 ~ 11021734 (-)

Expression



Co-expression Network