G112586



Basic Information


Item Value
gene id G112586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10365458 ~ 10365667 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128541
ATCCAAACAGGCTGTTATGAAAGGATGTGAAATTAAAATAGAAGATCAGAATGAATCTCCTCTACATATACAGACTTTTCAATTGTGTTTTCTAGTTCAGATCATTTCCATTGAAATGCCTGGATGCAACTGGGTCAATTTGTGGTTGCGTTCAGATAAACTGGGTATCAAAACAAGGCTAAAATGTGTGACCTTGTTTCTGTTATAAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128541 True 210 lncRNA 0.35 1 10365458 10365667

Neighbor


gene id symbol gene type direction distance location
LOC118944052 NA coding downstream 11213 10316778 ~ 10354245 (-)
LOC110507471 LOC106584706 coding downstream 56165 10300705 ~ 10309293 (-)
LOC110507454 LOC106584706 coding downstream 97809 10262320 ~ 10267649 (-)
trnaa-ugc-2 NA coding downstream 266481 10098902 ~ 10098977 (-)
LOC110493960 LOC106606059 coding downstream 358648 10000730 ~ 10007883 (-)
LOC110520767 ulk4 coding upstream 36252 10400640 ~ 10611447 (-)
ccka cck-l coding upstream 349638 10715305 ~ 10718380 (-)
eif3h LOC100196680 coding upstream 371077 10736729 ~ 10808244 (-)
LOC118937678 NA coding upstream 393692 10759359 ~ 10762238 (-)
LOC110512108 rad21 coding upstream 445846 10811513 ~ 10826012 (-)
G112559 NA non-coding downstream 35134 10330092 ~ 10330324 (-)
G112557 NA non-coding downstream 35500 10329618 ~ 10329958 (-)
G112491 LOC106584755 non-coding downstream 68459 10184147 ~ 10296999 (-)
G112875 NA non-coding upstream 26291 10391958 ~ 10392200 (-)
G112876 NA non-coding upstream 26612 10392279 ~ 10392498 (-)
G112881 NA non-coding upstream 39983 10405650 ~ 10405908 (-)
G112882 NA non-coding upstream 43220 10408887 ~ 10409103 (-)
G112567 NA other downstream 18523 10346471 ~ 10346935 (-)
G112076 LOC105018850 other downstream 585003 9779011 ~ 9780455 (-)
G112066 NA other downstream 603793 9761300 ~ 9761665 (-)
G112928 NA other upstream 204775 10570442 ~ 10570808 (-)
G112965 NA other upstream 282598 10648265 ~ 10718658 (-)
G113096 NA other upstream 655374 11021041 ~ 11021734 (-)
G113688 NA other upstream 844806 11210473 ~ 11218154 (-)

Expression



Co-expression Network