G112876



Basic Information


Item Value
gene id G112876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10392279 ~ 10392498 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128906
CAGGAATGCATCTATGGATTGGACTGAAAAATTCTTCAATGGACATCACGTACTTATCAAAAAAATTGCAGTACTTCGGTTCGGAATCCTAAAACGGGCAGCTTATTGTTTCAACTGAATTTACTAAAGAGACATTTACAATGGTATACTGAAAACGTTCTCAGAGGAATTTAGTTCTACTGCATGTCTGAAAATGGCTTATCTCTAGCCTAGGCACTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128906 True 220 lncRNA 0.44 1 10392279 10392498

Neighbor


gene id symbol gene type direction distance location
LOC118944052 NA coding downstream 38034 10316778 ~ 10354245 (-)
LOC110507471 LOC106584706 coding downstream 82986 10300705 ~ 10309293 (-)
LOC110507454 LOC106584706 coding downstream 124630 10262320 ~ 10267649 (-)
trnaa-ugc-2 NA coding downstream 293302 10098902 ~ 10098977 (-)
LOC110493960 LOC106606059 coding downstream 385469 10000730 ~ 10007883 (-)
LOC110520767 ulk4 coding upstream 9421 10400640 ~ 10611447 (-)
ccka cck-l coding upstream 322807 10715305 ~ 10718380 (-)
eif3h LOC100196680 coding upstream 344246 10736729 ~ 10808244 (-)
LOC118937678 NA coding upstream 366861 10759359 ~ 10762238 (-)
LOC110512108 rad21 coding upstream 419015 10811513 ~ 10826012 (-)
G112875 NA non-coding downstream 79 10391958 ~ 10392200 (-)
G112586 NA non-coding downstream 26612 10365458 ~ 10365667 (-)
G112559 NA non-coding downstream 61955 10330092 ~ 10330324 (-)
G112557 NA non-coding downstream 62321 10329618 ~ 10329958 (-)
G112492 NA non-coding downstream 98101 10235620 ~ 10294178 (-)
G112881 NA non-coding upstream 13152 10405650 ~ 10405908 (-)
G112882 NA non-coding upstream 16389 10408887 ~ 10409103 (-)
G112887 NA non-coding upstream 30121 10422619 ~ 10423230 (-)
G112888 NA non-coding upstream 44027 10436525 ~ 10437017 (-)
G112567 NA other downstream 45344 10346471 ~ 10346935 (-)
G112491 LOC106584755 other downstream 95280 10184147 ~ 10296999 (-)
G112076 LOC105018850 other downstream 611824 9779011 ~ 9780455 (-)
G112066 NA other downstream 630614 9761300 ~ 9761665 (-)
G112928 NA other upstream 177944 10570442 ~ 10570808 (-)
G112965 NA other upstream 255767 10648265 ~ 10718658 (-)
G113096 NA other upstream 628543 11021041 ~ 11021734 (-)
G113688 NA other upstream 817975 11210473 ~ 11218154 (-)

Expression



Co-expression Network