G112605



Basic Information


Item Value
gene id G112605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10408425 ~ 10408770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128561
GAGGAGCATCAGAGtgtggcctgtctctctctctctgtggtccctGGCTGACTGTTGAGATCAGTGTGTTGAGCTGTTGCGAAGGGAGAGGGACAGGCTCTGCTGCTCTCTACCATGGTCCCACCTACCTCAGCTTAGATCACAgtgtctgacacacacatacactacagagagacaaagagagagagaaagagagacggaggcaAATGAATCAGAACTCAAAAACGCCCGGAACATCCAATTACTAGAAGTTTCCTTCTTTTCGGAGGCCCTTTTGTAACCTCAATTCAATTAGTGTTCCAAGTCGTTAACTGAATATTGAAGCCGTTTTCAGATGAAATGAAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128561 True 346 lncRNA 0.44 1 10408425 10408770

Neighbor


gene id symbol gene type direction distance location
LOC110535244 ctnnb1 coding upstream 5780 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 111833 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 170046 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 188853 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 219310 10186105 ~ 10189115 (+)
LOC110507508 LOC106605488 coding downstream 217816 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 623222 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 675591 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 794117 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 818727 11227497 ~ 11243074 (+)
G112585 NA non-coding upstream 42758 10365393 ~ 10365667 (+)
G112566 NA non-coding upstream 61441 10346696 ~ 10346984 (+)
G112556 NA non-coding upstream 78464 10329550 ~ 10329961 (+)
G112273 NA non-coding upstream 106970 10258852 ~ 10301455 (+)
G112610 NA non-coding downstream 13863 10422633 ~ 10423207 (+)
G112612 NA non-coding downstream 19043 10427813 ~ 10428226 (+)
G112613 NA non-coding downstream 19522 10428292 ~ 10428545 (+)
G112616 NA non-coding downstream 25790 10434560 ~ 10434835 (+)
G112617 NA non-coding downstream 28638 10437408 ~ 10437872 (+)
LOC118937659 NA other upstream 631974 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 684554 9701990 ~ 9742723 (+)
G111788 NA other upstream 964384 9440309 ~ 9444041 (+)
G111453 NA other upstream 1076809 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1179400 9221418 ~ 9229025 (+)
G112697 NA other downstream 402748 10811518 ~ 10826063 (+)
elovl4a LOC106606161 other downstream 852784 11260912 ~ 11275480 (+)
G113285 NA other downstream 1006161 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1069206 11477976 ~ 11482741 (+)

Expression



Co-expression Network